ID H1YWC5_9EURY Unreviewed; 1146 AA.
AC H1YWC5;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894};
GN Name=smc {ECO:0000256|HAMAP-Rule:MF_01894};
GN ORFNames=Metlim_0724 {ECO:0000313|EMBL:EHQ34847.1};
OS Methanoplanus limicola DSM 2279.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.
OX NCBI_TaxID=937775 {ECO:0000313|EMBL:EHQ34847.1, ECO:0000313|Proteomes:UP000005741};
RN [1] {ECO:0000313|EMBL:EHQ34847.1, ECO:0000313|Proteomes:UP000005741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 2279 {ECO:0000313|EMBL:EHQ34847.1,
RC ECO:0000313|Proteomes:UP000005741};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M.,
RA Kyrpides N., Mavromatis K., Ivanova N., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Wirth R., Brambilla E.-M., Klenk H.-P.,
RA Eisen J.A.;
RT "The Improved High-Quality Draft genome of Methanoplanus limicola DSM
RT 2279.";
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for chromosome condensation and partitioning.
CC {ECO:0000256|HAMAP-Rule:MF_01894}.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|HAMAP-Rule:MF_01894}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01894}.
CC -!- DOMAIN: Contains large globular domains required for ATP hydrolysis at
CC each terminus and a third globular domain forming a flexible hinge near
CC the middle of the molecule. These domains are separated by coiled-coil
CC structures. {ECO:0000256|HAMAP-Rule:MF_01894}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC3 subfamily.
CC {ECO:0000256|ARBA:ARBA00005917}.
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DR EMBL; CM001436; EHQ34847.1; -; Genomic_DNA.
DR RefSeq; WP_004076562.1; NZ_CM001436.1.
DR AlphaFoldDB; H1YWC5; -.
DR STRING; 937775.Metlim_0724; -.
DR PATRIC; fig|937775.9.peg.842; -.
DR HOGENOM; CLU_001042_2_2_2; -.
DR InParanoid; H1YWC5; -.
DR OrthoDB; 9143at2157; -.
DR Proteomes; UP000005741; Chromosome.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0030261; P:chromosome condensation; IEA:InterPro.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR HAMAP; MF_01894; Smc_prok; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR InterPro; IPR011890; SMC_prok.
DR NCBIfam; TIGR02169; SMC_prok_A; 1.
DR NCBIfam; TIGR02168; SMC_prok_B; 1.
DR PANTHER; PTHR43977; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3; 1.
DR PANTHER; PTHR43977:SF1; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
DR SUPFAM; SSF57997; Tropomyosin; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|HAMAP-Rule:MF_01894};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|HAMAP-
KW Rule:MF_01894};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01894};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_01894};
KW Nucleotide-binding {ECO:0000256|HAMAP-Rule:MF_01894};
KW Reference proteome {ECO:0000313|Proteomes:UP000005741}.
FT DOMAIN 508..621
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT COILED 156..214
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01894"
FT COILED 251..391
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01894"
FT COILED 427..489
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01894"
FT COILED 805..923
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01894"
FT BINDING 32..39
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01894"
SQ SEQUENCE 1146 AA; 128993 MW; 698B56FF4D8ECCCA CRC64;
MYITELEVDN FKSFGKKTKI PFFEGFTVIS GPNGSGKSNI IDSVLFCLTL SGARGLRAEK
LTDLINLNTG KNTAEVSITF SEGTKIRRKI KRTPHGYYSY NYLNDRACKV GDIVEFLSRN
GIKPEGYNVV MQGDITRITE MSDTERRKII DEIAGVAEFD KKRDQALSEL EIVRERIERE
ELILAELENR IVELKEEKEQ ALKYRALEEE LEHLKSCHSY AKLAEKNKEL LAIRSLIEGQ
GVESEKFSAD KSLCRDELEN LKIRVKETED EINEKSGAEY LALLSEIEDA RGKIRFCEQS
IERLNAEKEK SKEAQQKNFA DMRRAESTVK EISDKIRNLS VDRSGLSMEL SGTRAELENA
ENQLSRDSQA VEGAKDELFS LRERLDKFRS QRSDLLKEQD LLIEKSRFRT EEKERLSERL
IQAESELNAR KGSLEEYSEL IKSLEAEKSV IDRELAASEG RLFENKGALE RVRSELRSLD
RELMRLEAQQ QASGGAGGRA MDYILGMDGI YGTVAQLGRA PPEYTNALNI AAGGRIRSIV
AESDSVASAC ISYLKDNRLG RMTFLPLNKL RAPDLPQISD PDVIGYAADL LEYDPLFDSV
FRHIFGRTVV VKDMATARRM MGRFRMVTLD GDLIEVAGAM TGGSLQKKMQ GFGVAADDGI
NALKAKISAL TAEEGDLRAA VERYENLAGE RRSRRSEIGG QVSKYSLLVE EFQKLCDSLN
TEIAGIQDKQ NNMAGDFSIG AVRLEKIESA LEGISEDIGS VEGSIESLKK KLGDTGIPEL
AEKVDFLRRK TADSERRLRN KDDDISDSQR ERQHFQNRLS EFQNDRERIE SDFKRIDEDI
LKNQAGISDA EAEMSSLEEK KDNFSVELNE LHDLRDELNS SVMAAEKKIF AINSEMERIR
LQLSSLKDRE DLLISEIEEL SARTSGVETD MSLDEIEKGI ESSERAIKRI GAVNMLAIEE
YERVDTRIKE RSGQKEVLSR ERANIIERIE HYEKMKYDSF MEAYTAIDSN FRSIFARLTE
GSGNLSLDST ADPFSGGMTF AVQPRGKKVH LLSALSGGEK SLTTLAFIFS IQQYMPAPFY
ALDEVDMMLD GSNVERISNM ISELSGNAQT ICVSLRRPTI ERADRIIGVT ARPDKSTYVT
GVKSNG
//
