ID H1Z1P0_9EURY Unreviewed; 628 AA.
AC H1Z1P0;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=DNA binding domain protein, excisionase family {ECO:0000313|EMBL:EHQ34566.1};
GN ORFNames=Metlim_0427 {ECO:0000313|EMBL:EHQ34566.1};
OS Methanoplanus limicola DSM 2279.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.
OX NCBI_TaxID=937775 {ECO:0000313|EMBL:EHQ34566.1, ECO:0000313|Proteomes:UP000005741};
RN [1] {ECO:0000313|EMBL:EHQ34566.1, ECO:0000313|Proteomes:UP000005741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 2279 {ECO:0000313|EMBL:EHQ34566.1,
RC ECO:0000313|Proteomes:UP000005741};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M.,
RA Kyrpides N., Mavromatis K., Ivanova N., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Wirth R., Brambilla E.-M., Klenk H.-P.,
RA Eisen J.A.;
RT "The Improved High-Quality Draft genome of Methanoplanus limicola DSM
RT 2279.";
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000256|ARBA:ARBA00006432}.
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DR EMBL; CM001436; EHQ34566.1; -; Genomic_DNA.
DR AlphaFoldDB; H1Z1P0; -.
DR STRING; 937775.Metlim_0427; -.
DR PATRIC; fig|937775.9.peg.502; -.
DR HOGENOM; CLU_000022_59_10_2; -.
DR InParanoid; H1Z1P0; -.
DR OrthoDB; 193284at2157; -.
DR Proteomes; UP000005741; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR041657; HTH_17.
DR InterPro; IPR010093; SinI_DNA-bd.
DR NCBIfam; TIGR01764; excise; 1.
DR PANTHER; PTHR43605:SF10; ACYL-COA SYNTHETASE MEDIUM CHAIN FAMILY MEMBER 3; 1.
DR PANTHER; PTHR43605; ACYL-COENZYME A SYNTHETASE; 1.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR Pfam; PF12728; HTH_17; 1.
DR SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 3: Inferred from homology;
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Reference proteome {ECO:0000313|Proteomes:UP000005741}.
FT DOMAIN 8..51
FT /note="Helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12728"
FT DOMAIN 104..466
FT /note="AMP-dependent synthetase/ligase"
FT /evidence="ECO:0000259|Pfam:PF00501"
FT DOMAIN 529..607
FT /note="AMP-binding enzyme C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13193"
FT REGION 50..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..66
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 628 AA; 71499 MW; A795857D50F3A03D CRC64;
MDYNDEKFYT PQEVADHLKV EARTVHAWLR DGTMKGMKVG RLWRISESEV SRARSGEKHP
ESQSYSRKNR KTSGIHNMMD YDETKANYKI EVPEYFNFGY DVIDHWAETD RNKLAMIWVD
QEGHEKKYSF RDLKNLSNQA ANIFLKYNIN KGDRVLIMLP RIPEWWIFVT AIIKLGAVVC
PCPVLLTPKD LKYRINAGKF RMVITDLENA PKVNEICDKC PTLRSRFLAD GELEGWASFP
FELLYPAPVS HKSVSMPADY RTRSDDPMLI YFTSGTTGEA KMVLHDNSYP LGHKVTAELW
HDLTPNDVHF TSSDTGWAKC AWGKIFGQWI AGACLLIIDV RGKFEATKLL PVIEKYEVTS
FCCPPTIYRM LILADLSKFD LSELRHCTSA GEPLNPEVIR VWQEGTGLTI HEGYGQTETC
CAIASFACME NKPGSMGKPS PGWNIELHDD DGKPVGNYEE GRIAISLNPK PVGLLVEYLD
NDEANAESFV NGFYYTGDKA YRDDDGYLWF VGRNDDVIKS SGYRIGPFEV ESALLEHPAV
KESAVVGSPD RIRGMVVKAF VVLNEGFEPG DELVRDIQKF VKRITAPYKY PRLIDFVDEL
PKTLSGKIKR NELREGELQK FKKARKEQ
//