GenomeNet

Database: UniProt
Entry: H1Z1P0_9EURY
LinkDB: H1Z1P0_9EURY
Original site: H1Z1P0_9EURY 
ID   H1Z1P0_9EURY            Unreviewed;       628 AA.
AC   H1Z1P0;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2012, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   SubName: Full=DNA binding domain protein, excisionase family {ECO:0000313|EMBL:EHQ34566.1};
GN   ORFNames=Metlim_0427 {ECO:0000313|EMBL:EHQ34566.1};
OS   Methanoplanus limicola DSM 2279.
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.
OX   NCBI_TaxID=937775 {ECO:0000313|EMBL:EHQ34566.1, ECO:0000313|Proteomes:UP000005741};
RN   [1] {ECO:0000313|EMBL:EHQ34566.1, ECO:0000313|Proteomes:UP000005741}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 2279 {ECO:0000313|EMBL:EHQ34566.1,
RC   ECO:0000313|Proteomes:UP000005741};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M.,
RA   Kyrpides N., Mavromatis K., Ivanova N., Markowitz V., Cheng J.-F.,
RA   Hugenholtz P., Woyke T., Wu D., Wirth R., Brambilla E.-M., Klenk H.-P.,
RA   Eisen J.A.;
RT   "The Improved High-Quality Draft genome of Methanoplanus limicola DSM
RT   2279.";
RL   Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC       {ECO:0000256|ARBA:ARBA00006432}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM001436; EHQ34566.1; -; Genomic_DNA.
DR   AlphaFoldDB; H1Z1P0; -.
DR   STRING; 937775.Metlim_0427; -.
DR   PATRIC; fig|937775.9.peg.502; -.
DR   HOGENOM; CLU_000022_59_10_2; -.
DR   InParanoid; H1Z1P0; -.
DR   OrthoDB; 193284at2157; -.
DR   Proteomes; UP000005741; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   Gene3D; 3.30.300.30; -; 1.
DR   Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR   InterPro; IPR025110; AMP-bd_C.
DR   InterPro; IPR045851; AMP-bd_C_sf.
DR   InterPro; IPR020845; AMP-binding_CS.
DR   InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR   InterPro; IPR042099; ANL_N_sf.
DR   InterPro; IPR009061; DNA-bd_dom_put_sf.
DR   InterPro; IPR041657; HTH_17.
DR   InterPro; IPR010093; SinI_DNA-bd.
DR   NCBIfam; TIGR01764; excise; 1.
DR   PANTHER; PTHR43605:SF10; ACYL-COA SYNTHETASE MEDIUM CHAIN FAMILY MEMBER 3; 1.
DR   PANTHER; PTHR43605; ACYL-COENZYME A SYNTHETASE; 1.
DR   Pfam; PF00501; AMP-binding; 1.
DR   Pfam; PF13193; AMP-binding_C; 1.
DR   Pfam; PF12728; HTH_17; 1.
DR   SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 1.
DR   SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR   PROSITE; PS00455; AMP_BINDING; 1.
PE   3: Inferred from homology;
KW   Ligase {ECO:0000256|ARBA:ARBA00022598};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005741}.
FT   DOMAIN          8..51
FT                   /note="Helix-turn-helix"
FT                   /evidence="ECO:0000259|Pfam:PF12728"
FT   DOMAIN          104..466
FT                   /note="AMP-dependent synthetase/ligase"
FT                   /evidence="ECO:0000259|Pfam:PF00501"
FT   DOMAIN          529..607
FT                   /note="AMP-binding enzyme C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF13193"
FT   REGION          50..70
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        50..66
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   628 AA;  71499 MW;  A795857D50F3A03D CRC64;
     MDYNDEKFYT PQEVADHLKV EARTVHAWLR DGTMKGMKVG RLWRISESEV SRARSGEKHP
     ESQSYSRKNR KTSGIHNMMD YDETKANYKI EVPEYFNFGY DVIDHWAETD RNKLAMIWVD
     QEGHEKKYSF RDLKNLSNQA ANIFLKYNIN KGDRVLIMLP RIPEWWIFVT AIIKLGAVVC
     PCPVLLTPKD LKYRINAGKF RMVITDLENA PKVNEICDKC PTLRSRFLAD GELEGWASFP
     FELLYPAPVS HKSVSMPADY RTRSDDPMLI YFTSGTTGEA KMVLHDNSYP LGHKVTAELW
     HDLTPNDVHF TSSDTGWAKC AWGKIFGQWI AGACLLIIDV RGKFEATKLL PVIEKYEVTS
     FCCPPTIYRM LILADLSKFD LSELRHCTSA GEPLNPEVIR VWQEGTGLTI HEGYGQTETC
     CAIASFACME NKPGSMGKPS PGWNIELHDD DGKPVGNYEE GRIAISLNPK PVGLLVEYLD
     NDEANAESFV NGFYYTGDKA YRDDDGYLWF VGRNDDVIKS SGYRIGPFEV ESALLEHPAV
     KESAVVGSPD RIRGMVVKAF VVLNEGFEPG DELVRDIQKF VKRITAPYKY PRLIDFVDEL
     PKTLSGKIKR NELREGELQK FKKARKEQ
//
DBGET integrated database retrieval system