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Database: UniProt
Entry: H2IZG1_RAHAC
LinkDB: H2IZG1_RAHAC
Original site: H2IZG1_RAHAC 
ID   H2IZG1_RAHAC            Unreviewed;       343 AA.
AC   H2IZG1;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2012, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AEX52148.1};
GN   OrderedLocusNames=Rahaq2_2293 {ECO:0000313|EMBL:AEX52148.1};
OS   Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 /
OS   NCIMB 13365 / CIP 78.65).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Yersiniaceae; Rahnella.
OX   NCBI_TaxID=745277 {ECO:0000313|EMBL:AEX52148.1, ECO:0000313|Proteomes:UP000009010};
RN   [1] {ECO:0000313|EMBL:AEX52148.1, ECO:0000313|Proteomes:UP000009010}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC   CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RX   PubMed=22582378; DOI=10.1128/JB.00380-12;
RA   Martinez R.J., Bruce D., Detter C., Goodwin L.A., Han J., Han C.S.,
RA   Held B., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S.,
RA   Tapia R., Woyke T., Sobecky P.A.;
RT   "Complete Genome Sequence of Rahnella aquatilis CIP 78.65.";
RL   J. Bacteriol. 194:3020-3021(2012).
RN   [2] {ECO:0000313|Proteomes:UP000009010}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC   CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RA   Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P.,
RA   Martinez R., Woyke T.;
RT   "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65.";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP003244; AEX52148.1; -; Genomic_DNA.
DR   RefSeq; WP_015697315.1; NC_016818.1.
DR   AlphaFoldDB; H2IZG1; -.
DR   STRING; 745277.Rahaq2_2293; -.
DR   GeneID; 61512353; -.
DR   KEGG; raq:Rahaq2_2293; -.
DR   PATRIC; fig|745277.3.peg.2208; -.
DR   eggNOG; COG1609; Bacteria.
DR   HOGENOM; CLU_037628_6_0_6; -.
DR   OMA; RNIHAVH; -.
DR   OrthoDB; 9798934at2; -.
DR   Proteomes; UP000009010; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd01392; HTH_LacI; 1.
DR   Gene3D; 3.40.50.2300; -; 2.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR000843; HTH_LacI.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   PANTHER; PTHR30146:SF142; HTH-TYPE TRANSCRIPTIONAL REPRESSOR PURR-RELATED; 1.
DR   PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR   Pfam; PF00356; LacI; 1.
DR   Pfam; PF00532; Peripla_BP_1; 1.
DR   SMART; SM00354; HTH_LACI; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR   PROSITE; PS00356; HTH_LACI_1; 1.
DR   PROSITE; PS50932; HTH_LACI_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009010};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          6..60
FT                   /note="HTH lacI-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50932"
SQ   SEQUENCE   343 AA;  36498 MW;  FA877BAAE7B116FA CRC64;
     MNPKKITIID VAQHAGVSVT TVSLVLSGKG RISQTTAERV NRAVDELGFV RNRQASTLRG
     GESGVVGLIV RDICEPFYAE MTAGLSEMFE AQGKVLFLLQ SGPSGKGLMR CFDTLLTHGV
     DGIVIAGGVN TLGGLREKAE EHGVPLICAA RSGGIEGVDV VRPDNMLAAK MATEYLIKQG
     HKQIAYLGGL SNSLTRAERL GGFCATLLQY GLPFRTEWII ECDYQQKCAA DAAETLLSRY
     PKISAIVCHK SSVALGAYFG VMRTGAQVGG GAVDSFFQQK IALIGMEDAP ESELTEPPLT
     SIANSAREIG HATARRLLLR IGGQNLEAQN IIVPPGLVER ESA
//
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