ID H2LB95_ORYLA Unreviewed; 658 AA.
AC H2LB95;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 24-JAN-2024, entry version 68.
DE SubName: Full=F-box protein 40 {ECO:0000313|Ensembl:ENSORLP00000003164.2};
GN Name=FBXO40 {ECO:0000313|Ensembl:ENSORLP00000003164.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000003164.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000003164.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000003164.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000003164.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000003164.2};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; H2LB95; -.
DR Ensembl; ENSORLT00000003165.2; ENSORLP00000003164.2; ENSORLG00000002543.2.
DR eggNOG; ENOG502QVHX; Eukaryota.
DR GeneTree; ENSGT00950000183204; -.
DR HOGENOM; CLU_013357_0_0_1; -.
DR TreeFam; TF343227; -.
DR Proteomes; UP000001038; Chromosome 13.
DR Bgee; ENSORLG00000002543; Expressed in heart and 3 other cell types or tissues.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.30.40.150; TRAF-like zinc-finger, N-terminal subdomain; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR031890; Fbxo30/Fbxo40.
DR InterPro; IPR001293; Znf_TRAF.
DR InterPro; IPR043013; Znf_TRAF_N.
DR PANTHER; PTHR15933:SF1; F-BOX ONLY PROTEIN 40; 1.
DR PANTHER; PTHR15933; PROTEIN CBG16327; 1.
DR Pfam; PF15966; F-box_4; 1.
DR Pfam; PF15965; zf-TRAF_2; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS50145; ZF_TRAF; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00207}; Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00207};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00207}.
FT DOMAIN 48..90
FT /note="TRAF-type"
FT /evidence="ECO:0000259|PROSITE:PS50145"
FT DOMAIN 540..594
FT /note="F-box"
FT /evidence="ECO:0000259|PROSITE:PS50181"
FT ZN_FING 48..90
FT /note="TRAF-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00207"
FT REGION 218..242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 621..644
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 658 AA; 73802 MW; B57C5A24C753180C CRC64;
MPKVHHEHCD KCFSAHCQVL VQTSRSCMVT KCPKNCGTVL HACKREEHVL LCPNETVPCL
NAFYGCPLTM QRQKLAKHLE VCPASVVCCS QEWNRWPVSD TNETFYRSVS EKLQSDSEVS
LDVALALRDQ ALLFQSIKMK CIFPEMMADE LQMSASGELS CSSDFSEFTE NGCAEELEEK
KEEGRHDLAK SEEVANIQNY TSWEKIFRKE KEGCNQTVKN LNKETRGKKE QEASKDQEGL
RDAADRNAVA SRGLHGITGL APWQDGVLDR LCREANMAEY NMYLVHNGSM LINFGQLAAC
TPREKDFVYG NLEPIEVKTV RSYKVPTSYR AKRVHLENPA CKAKIRHQSV DTTDLGFSVE
DLPKSDEIGS ALLCSMEKEL KGHLISESTS TDGFYIDVGT QTHSFPSAPF RADASLTDLI
ANKHPGLHVS VETESVTRRH NRRSSAFSYE CGQFFRRDEF PSHVRNAHCD IQAQLNGWFQ
QRCPLAYLGC THTQMRFHPA GQQATITFKK DASAMALQPL VPSSLRESEK NPGGSATPQL
DILSSLPLEI LQNIAAHLDS FTLSQLSLVS HLMRDVCGSL LRQRGMVFLH WTKKTYSHGG
TSWKCHKKQM GFIQMELGDG WGRKTSQRPS VGAEAETSQR RGCHQGPTFL SRKCADCT
//