ID H2LGS3_ORYLA Unreviewed; 205 AA.
AC H2LGS3;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=RNA binding protein, mRNA processing factor {ECO:0000313|Ensembl:ENSORLP00000005172.2};
GN Name=RBPMS {ECO:0000313|Ensembl:ENSORLP00000005172.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000005172.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000005172.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000005172.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000005172.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000005172.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H2LGS3; -.
DR STRING; 8090.ENSORLP00000005172; -.
DR Ensembl; ENSORLT00000005173.2; ENSORLP00000005172.2; ENSORLG00000004135.2.
DR eggNOG; KOG1457; Eukaryota.
DR GeneTree; ENSGT00940000159617; -.
DR HOGENOM; CLU_099973_1_1_1; -.
DR InParanoid; H2LGS3; -.
DR TreeFam; TF351070; -.
DR Proteomes; UP000001038; Chromosome 18.
DR Bgee; ENSORLG00000004135; Expressed in heart and 15 other cell types or tissues.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR CDD; cd12682; RRM_RBPMS; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR10501:SF25; RNA-BINDING PROTEIN WITH MULTIPLE SPLICING; 1.
DR PANTHER; PTHR10501; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 34..111
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 119..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 205 AA; 23019 MW; 84D6C635867399E4 CRC64;
MNNNKTEKEN ETTEFTNHEE ENPPLHPREG RKVRTLFVSG LPLDIKPREL YLLFRPFKGY
EGSLIKLTSK QPVGFVSFDS RSEAEAAKNA LNGVRFDPEI PQTLRLEFAK ANTKMAKNKL
VGTPNPPPSQ QSPGPQFISR DPYELTVPAL YPGSPDVWAS YPLYPAELSP ALPPAFTYPS
SLHAQIRWLP PADGTPQGWK SRQFC
//
