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Database: UniProt
Entry: H2LU55_ORYLA
LinkDB: H2LU55_ORYLA
Original site: H2LU55_ORYLA 
ID   H2LU55_ORYLA            Unreviewed;       136 AA.
AC   H2LU55;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2012, sequence version 1.
DT   24-JAN-2024, entry version 89.
DE   RecName: Full=Histone H3 {ECO:0000256|RuleBase:RU004471};
GN   Name=LOC101163693 {ECO:0000313|Ensembl:ENSORLP00000026643.1};
GN   Synonyms=H3-3A {ECO:0000313|Ensembl:ENSORLP00000037083.1},
GN   LOC101175183 {ECO:0000313|Ensembl:ENSORLP00000032228.1};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC   Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000033843.1, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Ensembl:ENSORLP00000033843.1, ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000033843.1,
RC   ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA   Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA   Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA   Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA   Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA   Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000033843.1}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000033843.1};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC       each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC       two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC       DNA. {ECO:0000256|RuleBase:RU004471}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the histone H3 family.
CC       {ECO:0000256|ARBA:ARBA00010343, ECO:0000256|RuleBase:RU004471}.
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DR   RefSeq; XP_004080398.1; XM_004080350.2.
DR   RefSeq; XP_004084106.1; XM_004084058.2.
DR   RefSeq; XP_011480935.1; XM_011482633.1.
DR   RefSeq; XP_011480936.1; XM_011482634.1.
DR   SMR; H2LU55; -.
DR   Ensembl; ENSORLT00000029477.1; ENSORLP00000037083.1; ENSORLG00000024385.1.
DR   Ensembl; ENSORLT00000030026.1; ENSORLP00000032228.1; ENSORLG00000026243.1.
DR   Ensembl; ENSORLT00000037908.1; ENSORLP00000026643.1; ENSORLG00000026522.1.
DR   Ensembl; ENSORLT00000046325.1; ENSORLP00000033843.1; ENSORLG00000028044.1.
DR   GeneID; 101160039; -.
DR   GeneID; 101163693; -.
DR   KEGG; ola:101160039; -.
DR   KEGG; ola:101163693; -.
DR   CTD; 394076; -.
DR   eggNOG; KOG1745; Eukaryota.
DR   GeneTree; ENSGT01100000263504; -.
DR   HOGENOM; CLU_078295_4_0_1; -.
DR   OMA; HFAMART; -.
DR   OrthoDB; 4264035at2759; -.
DR   Proteomes; UP000001038; Chromosome 13.
DR   Proteomes; UP000001038; Chromosome 14.
DR   Proteomes; UP000001038; Chromosome 19.
DR   Bgee; ENSORLG00000024385; Expressed in mesonephros and 14 other cell types or tissues.
DR   GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR   GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR   Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR   InterPro; IPR009072; Histone-fold.
DR   InterPro; IPR007125; Histone_H2A/H2B/H3.
DR   InterPro; IPR000164; Histone_H3/CENP-A.
DR   PANTHER; PTHR11426; HISTONE H3; 1.
DR   PANTHER; PTHR11426:SF190; HISTONE H3.3; 1.
DR   Pfam; PF00125; Histone; 1.
DR   PRINTS; PR00622; HISTONEH3.
DR   SMART; SM00428; H3; 1.
DR   SUPFAM; SSF47113; Histone-fold; 1.
DR   PROSITE; PS00322; HISTONE_H3_1; 1.
DR   PROSITE; PS00959; HISTONE_H3_2; 1.
PE   3: Inferred from homology;
KW   ADP-ribosylation {ECO:0000256|ARBA:ARBA00022765};
KW   Chromosome {ECO:0000256|RuleBase:RU004471};
KW   DNA-binding {ECO:0000256|RuleBase:RU004471};
KW   Nucleosome core {ECO:0000256|RuleBase:RU004471};
KW   Nucleus {ECO:0000256|RuleBase:RU004471};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT   DOMAIN          1..132
FT                   /note="Histone H2A/H2B/H3"
FT                   /evidence="ECO:0000259|Pfam:PF00125"
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   136 AA;  15328 MW;  5158ED279E6F9E1C CRC64;
     MARTKQTARK STGGKAPRKQ LATKAARKSA PSTGGVKKPH RYRPGTVALR EIRRYQKSTE
     LLIRKLPFQR LVREIAQDFK TDLRFQSAAI GALQEASEAY LVGLFEDTNL CAIHAKRVTI
     MPKDIQLARR IRGERA
//
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