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Database: UniProt
Entry: H2LVS5_ORYLA
LinkDB: H2LVS5_ORYLA
Original site: H2LVS5_ORYLA 
ID   H2LVS5_ORYLA            Unreviewed;       854 AA.
AC   H2LVS5; H2LVS1;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 2.
DT   27-MAR-2024, entry version 59.
DE   SubName: Full=Prickle homolog 2b {ECO:0000313|Ensembl:ENSORLP00000010210.2};
GN   Name=prickle2b {ECO:0000313|Ensembl:ENSORLP00000010210.2};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC   Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000010210.2, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Ensembl:ENSORLP00000010210.2, ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010210.2,
RC   ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA   Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA   Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA   Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA   Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA   Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000010210.2}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010210.2};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the prickle / espinas / testin family.
CC       {ECO:0000256|ARBA:ARBA00008268}.
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DR   RefSeq; XP_011473385.1; XM_011475083.1.
DR   Ensembl; ENSORLT00000010207.2; ENSORLP00000010206.2; ENSORLG00000008127.2.
DR   Ensembl; ENSORLT00000010211.2; ENSORLP00000010210.2; ENSORLG00000008127.2.
DR   Ensembl; ENSORLT00000037449.1; ENSORLP00000039568.1; ENSORLG00000008127.2.
DR   GeneID; 101164394; -.
DR   CTD; 368250; -.
DR   GeneTree; ENSGT00940000153629; -.
DR   HOGENOM; CLU_008937_5_0_1; -.
DR   OrthoDB; 370973at2759; -.
DR   Proteomes; UP000001038; Chromosome 5.
DR   Bgee; ENSORLG00000008127; Expressed in animal zygote and 12 other cell types or tissues.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd09415; LIM1_Prickle; 1.
DR   CDD; cd09418; LIM2_Prickle; 1.
DR   CDD; cd09420; LIM3_Prickle; 1.
DR   CDD; cd09827; PET_Prickle; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 3.
DR   InterPro; IPR033725; LIM1_prickle.
DR   InterPro; IPR033726; LIM2_prickle.
DR   InterPro; IPR033727; LIM3_prickle.
DR   InterPro; IPR010442; PET_domain.
DR   InterPro; IPR033723; PET_prickle.
DR   InterPro; IPR047120; Pk/Esn/Tes.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR24211; LIM DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR24211:SF18; PRICKLE-LIKE PROTEIN 2; 1.
DR   Pfam; PF00412; LIM; 3.
DR   Pfam; PF06297; PET; 1.
DR   SMART; SM00132; LIM; 3.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 2.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 2.
DR   PROSITE; PS51303; PET; 1.
PE   3: Inferred from homology;
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW   ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT   DOMAIN          14..122
FT                   /note="PET"
FT                   /evidence="ECO:0000259|PROSITE:PS51303"
FT   DOMAIN          124..188
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   DOMAIN          189..249
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   REGION          310..349
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          374..403
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          416..443
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          548..577
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          664..703
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          725..745
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          827..854
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        310..328
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        552..566
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        839..854
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   854 AA;  95813 MW;  3193E1CC698EE2CD CRC64;
     MPVEMEKMVT KLMYDFQRNS TSDDDSGCAL EEYAWVPPGL KPEQVHQYYN SLPEDKVPYV
     NSAGEKYRIK QLLHQLPPHD NEVRYCNGLD DEEKRELKLF SNQRKQENLG RGNVRLFPVT
     MTGAICEQCA GHINGGDIAV FASRAGLGVC WHPACFVCSM CKELLVDLIY FHQDGKIYCG
     RHHAERLKPR CTACDEIIFA DECTEAEGRH WHMKHFCCFE CETMLGGQRY IMKEGRPYCC
     SCFESLYAEY CDSCGEHIGI DQGQMTYDGQ HWHATEGCFC CARCKRSLLG RPFLPKQGQI
     FCSRSCSLGE EPNGSDSSDS AFQSARSTRE SRRSSKTAKG GGGAGGVQAE RFSGEVDPLS
     LQMDLLSLSS LTREPPAWQN KEQASEGHGY ESHRDTSSSP TPLQLLSQCN VRSAFNSSCS
     GQNGQDHRIK ENGGFKRPHI SATKGHSLND MWFQQGAPEE YYPPKLRTQK SYTEVSHCSQ
     QQNGFTSDKR SISFHGFQRG RDAGPPTAVQ VPRSRNPINA LSFTEQLTPL VQTPKGSTES
     LALLNATGTS ADRGGKHEEH LSHFSMPDLS KDSGMKSNVE TLNSSEQLRS SESIHSLTAS
     QSYMEMNPSR SSQYQMQFCD PDSMGVGKAV THLPPNFTYQ EEDRISLVNA NAARLPPISE
     FKVSGAAGRG ASVRIDAPET PQRRRHHHHR PRRSRRSRSE NALNLVAERR VRPQERSQFR
     VREDYDRFPP PRTTRDQFGI GGGGRYQPQL FRQCPRTTSD LTLQNPGASR ATGLSQYSWD
     DYYDDDWCST CSSSSESEDE GYFLGEPIPR PVQLRYLSNQ ELVQKYSSSG VGGANRSGQK
     SSRKRRKSKN CIIS
//
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