ID H2LVS5_ORYLA Unreviewed; 854 AA.
AC H2LVS5; H2LVS1;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Prickle homolog 2b {ECO:0000313|Ensembl:ENSORLP00000010210.2};
GN Name=prickle2b {ECO:0000313|Ensembl:ENSORLP00000010210.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000010210.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000010210.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010210.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000010210.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010210.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the prickle / espinas / testin family.
CC {ECO:0000256|ARBA:ARBA00008268}.
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DR RefSeq; XP_011473385.1; XM_011475083.1.
DR Ensembl; ENSORLT00000010207.2; ENSORLP00000010206.2; ENSORLG00000008127.2.
DR Ensembl; ENSORLT00000010211.2; ENSORLP00000010210.2; ENSORLG00000008127.2.
DR Ensembl; ENSORLT00000037449.1; ENSORLP00000039568.1; ENSORLG00000008127.2.
DR GeneID; 101164394; -.
DR CTD; 368250; -.
DR GeneTree; ENSGT00940000153629; -.
DR HOGENOM; CLU_008937_5_0_1; -.
DR OrthoDB; 370973at2759; -.
DR Proteomes; UP000001038; Chromosome 5.
DR Bgee; ENSORLG00000008127; Expressed in animal zygote and 12 other cell types or tissues.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd09415; LIM1_Prickle; 1.
DR CDD; cd09418; LIM2_Prickle; 1.
DR CDD; cd09420; LIM3_Prickle; 1.
DR CDD; cd09827; PET_Prickle; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 3.
DR InterPro; IPR033725; LIM1_prickle.
DR InterPro; IPR033726; LIM2_prickle.
DR InterPro; IPR033727; LIM3_prickle.
DR InterPro; IPR010442; PET_domain.
DR InterPro; IPR033723; PET_prickle.
DR InterPro; IPR047120; Pk/Esn/Tes.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24211; LIM DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24211:SF18; PRICKLE-LIKE PROTEIN 2; 1.
DR Pfam; PF00412; LIM; 3.
DR Pfam; PF06297; PET; 1.
DR SMART; SM00132; LIM; 3.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 2.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 2.
DR PROSITE; PS51303; PET; 1.
PE 3: Inferred from homology;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 14..122
FT /note="PET"
FT /evidence="ECO:0000259|PROSITE:PS51303"
FT DOMAIN 124..188
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 189..249
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 310..349
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 374..403
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 416..443
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..577
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 664..703
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 725..745
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 827..854
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 310..328
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 552..566
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 839..854
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 854 AA; 95813 MW; 3193E1CC698EE2CD CRC64;
MPVEMEKMVT KLMYDFQRNS TSDDDSGCAL EEYAWVPPGL KPEQVHQYYN SLPEDKVPYV
NSAGEKYRIK QLLHQLPPHD NEVRYCNGLD DEEKRELKLF SNQRKQENLG RGNVRLFPVT
MTGAICEQCA GHINGGDIAV FASRAGLGVC WHPACFVCSM CKELLVDLIY FHQDGKIYCG
RHHAERLKPR CTACDEIIFA DECTEAEGRH WHMKHFCCFE CETMLGGQRY IMKEGRPYCC
SCFESLYAEY CDSCGEHIGI DQGQMTYDGQ HWHATEGCFC CARCKRSLLG RPFLPKQGQI
FCSRSCSLGE EPNGSDSSDS AFQSARSTRE SRRSSKTAKG GGGAGGVQAE RFSGEVDPLS
LQMDLLSLSS LTREPPAWQN KEQASEGHGY ESHRDTSSSP TPLQLLSQCN VRSAFNSSCS
GQNGQDHRIK ENGGFKRPHI SATKGHSLND MWFQQGAPEE YYPPKLRTQK SYTEVSHCSQ
QQNGFTSDKR SISFHGFQRG RDAGPPTAVQ VPRSRNPINA LSFTEQLTPL VQTPKGSTES
LALLNATGTS ADRGGKHEEH LSHFSMPDLS KDSGMKSNVE TLNSSEQLRS SESIHSLTAS
QSYMEMNPSR SSQYQMQFCD PDSMGVGKAV THLPPNFTYQ EEDRISLVNA NAARLPPISE
FKVSGAAGRG ASVRIDAPET PQRRRHHHHR PRRSRRSRSE NALNLVAERR VRPQERSQFR
VREDYDRFPP PRTTRDQFGI GGGGRYQPQL FRQCPRTTSD LTLQNPGASR ATGLSQYSWD
DYYDDDWCST CSSSSESEDE GYFLGEPIPR PVQLRYLSNQ ELVQKYSSSG VGGANRSGQK
SSRKRRKSKN CIIS
//