ID H2LXJ2_ORYLA Unreviewed; 197 AA.
AC H2LXJ2;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=INO80 complex subunit C {ECO:0000313|Ensembl:ENSORLP00000010853.2};
GN Name=ino80c {ECO:0000313|Ensembl:ENSORLP00000010853.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000010853.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000010853.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010853.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000010853.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000010853.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_004077908.1; XM_004077860.2.
DR AlphaFoldDB; H2LXJ2; -.
DR STRING; 8090.ENSORLP00000010853; -.
DR Ensembl; ENSORLT00000010854.2; ENSORLP00000010853.2; ENSORLG00000008652.2.
DR GeneID; 101166331; -.
DR KEGG; ola:101166331; -.
DR CTD; 125476; -.
DR eggNOG; KOG4137; Eukaryota.
DR GeneTree; ENSGT00390000014303; -.
DR HOGENOM; CLU_071116_0_0_1; -.
DR InParanoid; H2LXJ2; -.
DR OrthoDB; 12071at2759; -.
DR TreeFam; TF323529; -.
DR Proteomes; UP000001038; Chromosome 16.
DR Bgee; ENSORLG00000008652; Expressed in gastrula and 14 other cell types or tissues.
DR GO; GO:0031011; C:Ino80 complex; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR InterPro; IPR029525; INO80C/Ies6.
DR InterPro; IPR013272; Vps72/YL1_C.
DR PANTHER; PTHR31200; INO80 COMPLEX SUBUNIT C; 1.
DR PANTHER; PTHR31200:SF1; INO80 COMPLEX SUBUNIT C; 1.
DR Pfam; PF08265; YL1_C; 1.
DR SMART; SM00993; YL1_C; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 146..175
FT /note="Vps72/YL1 C-terminal"
FT /evidence="ECO:0000259|SMART:SM00993"
FT REGION 1..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..60
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 197 AA; 21069 MW; 885650C007C45234 CRC64;
MASQNPITVK PSLSVAGSVA VRGKKRPGSP AVLQTAGSSS STKKKKGPPI TTTQTKVTAT
EAILEVKAAE SVDGGPPATE STVKPPPFKD HTFQHSGIGG AAAGKKNRTW KNLKQLLVLE
RALPWKLDDP NYYNIDAPPS LKPAKKYSDI SGLPANYTDP QTKLRFTSPD EFSYIRLLPS
DVVTGYLTLR KATCIVP
//
