GenomeNet

Database: UniProt
Entry: H2MGC6_ORYLA
LinkDB: H2MGC6_ORYLA
Original site: H2MGC6_ORYLA 
ID   H2MGC6_ORYLA            Unreviewed;       375 AA.
AC   H2MGC6;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 2.
DT   24-JAN-2024, entry version 64.
DE   SubName: Full=Cell adhesion molecule 4 {ECO:0000313|Ensembl:ENSORLP00000017661.2};
GN   Name=cadm4 {ECO:0000313|Ensembl:ENSORLP00000017661.2};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC   Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000017661.2, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Ensembl:ENSORLP00000017661.2, ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000017661.2,
RC   ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA   Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA   Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA   Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA   Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA   Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000017661.2}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000017661.2};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   AlphaFoldDB; H2MGC6; -.
DR   Ensembl; ENSORLT00000017662.2; ENSORLP00000017661.2; ENSORLG00000014086.2.
DR   GeneTree; ENSGT00940000161223; -.
DR   HOGENOM; CLU_047574_2_1_1; -.
DR   Proteomes; UP000001038; Chromosome 16.
DR   Bgee; ENSORLG00000014086; Expressed in brain and 14 other cell types or tissues.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 3.
DR   InterPro; IPR013162; CD80_C2-set.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR013106; Ig_V-set.
DR   PANTHER; PTHR45889:SF3; CELL ADHESION MOLECULE 4; 1.
DR   PANTHER; PTHR45889; IG-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF08205; C2-set_2; 1.
DR   Pfam; PF13927; Ig_3; 1.
DR   Pfam; PF07686; V-set; 1.
DR   PIRSF; PIRSF000615; TyrPK_CSF1-R; 3.
DR   SMART; SM00409; IG; 3.
DR   SMART; SM00408; IGc2; 2.
DR   SUPFAM; SSF48726; Immunoglobulin; 3.
DR   PROSITE; PS50835; IG_LIKE; 3.
PE   4: Predicted;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..37
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           38..375
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5017234450"
FT   TRANSMEM        335..359
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          33..130
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          135..224
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          234..317
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
SQ   SEQUENCE   375 AA;  41725 MW;  5E318797F75BAD1E CRC64;
     MRPVQSTVFC RCLLFSPSLA LCSLVMALIC ITPRCQAVQA ESVTVLEGGT AHISCHLQNY
     DGSIVVIQNP RRQTLFFNGT RALKEDRFQM VLFTPHLMRI SLTNVSVSDE GGYYCQLYTE
     STHHHVATLS VLVPPETPTV EVKQEAVEGG QAELTCMSPR SKPAATLRWM RNGREIPGDV
     SQQENGKTFS VFSTIRIPVE RKDNGAALNC EATHPALNDQ KKIRHYRLDV YFAPTVRIIY
     PLGILREGDS LTLTCSVTGN PLPRHIQWSK INDTLPERAE ISGPTLQISR LSQSHNGTYL
     CQAQNNFGRA ADQYTLLVYD PGAIVDSQSA VPYKAIAVVL ALLVFTVICV LVVTIWCSVR
     QKGSYRTREP ILAWY
//
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