ID H2MSZ9_ORYLA Unreviewed; 1580 AA.
AC H2MSZ9;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=RB1 inducible coiled-coil 1 {ECO:0000313|Ensembl:ENSORLP00000021892.3};
GN Name=RB1CC1 {ECO:0000313|Ensembl:ENSORLP00000021892.3};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000021892.3, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000021892.3, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000021892.3,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000021892.3}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000021892.3};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR Ensembl; ENSORLT00000021893.3; ENSORLP00000021892.3; ENSORLG00000017508.3.
DR eggNOG; KOG4572; Eukaryota.
DR GeneTree; ENSGT00390000015871; -.
DR HOGENOM; CLU_003711_0_0_1; -.
DR TreeFam; TF323750; -.
DR Proteomes; UP000001038; Chromosome 17.
DR Bgee; ENSORLG00000017508; Expressed in intestine and 14 other cell types or tissues.
DR GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR CDD; cd17060; Ubl_RB1CC1; 1.
DR InterPro; IPR040040; ATG11.
DR InterPro; IPR019460; Atg11_C.
DR InterPro; IPR045326; ATG17-like_dom.
DR PANTHER; PTHR13222; RB1-INDUCIBLE COILED-COIL; 1.
DR PANTHER; PTHR13222:SF1; RB1-INDUCIBLE COILED-COIL PROTEIN 1; 1.
DR Pfam; PF10377; ATG11; 1.
DR Pfam; PF04108; ATG17_like; 1.
PE 4: Predicted;
KW Autophagy {ECO:0000256|ARBA:ARBA00023006};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT DOMAIN 126..537
FT /note="Autophagy protein ATG17-like"
FT /evidence="ECO:0000259|Pfam:PF04108"
FT DOMAIN 1469..1574
FT /note="Autophagy-related protein 11 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10377"
FT REGION 216..275
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 643..684
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1216..1237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 858..1050
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1361..1388
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1445..1472
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 216..240
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..260
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 643..672
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1580 AA; 179941 MW; 690043BC14E614B6 CRC64;
MKLYVFQVNN GSTLTFDTDL AVQTVHQLKH AIQAKYKIAI QHQVLVVNGG ECMAVDRRVC
SYSAGTETNP IFLFNKEMIL SDRDPTIPKT TFSIESEIQV KVEESLLMPA VFHTVASRTQ
LALVEMFEVA NKLCSFCERL VHDEHLQHQG WAAIMANLDD CTQSYQRLLS KFNISYTNYQ
HDLEEIKVKL SKLGTAVSVM ARIPLLECLT RHSYKESMEK SGSSPGKDSD ETEEEKSTDS
VRFTAQAQIP HMSPSAPSAS GSAADELHGE QETNEMADSG ELKAALLDDS TPELTNQPLF
NVTLLDWINV QDRPNDVEAV VRKCFDSINR LDPRIIQPFL ADCCETIAKL DNQNMKAIKG
LEDRLYALDQ MIASCKKLVN EQKELAQGFL ANQKRAENLK DTSVLPDLCL SHTNQLMIML
NNHRKLLDIK KKCTTAKQEL ANNLQVRLKW CCYVMLHADQ DAEKLQALLR LLTELMERVR
VVEALSTVPQ MYCLAVVEVV RRKMFMRHYR AWANALVKDG KRLYEAEKFK RESFGKLFRK
SFLRNRLFRG LDSWPPTSFC TRRPRRFDDE LPDISLDDLQ YLKSCCPDEV QPFLMVPSMC
DLEPLNRHVE KLHQLVQAAQ SVDEMSQTIT DLLSEQRASC TQSAQRSSVL SENTPTSPKT
PPSLSLQGTS CQPLHVPIPA PLEDLSPDSI DAQTFDFETI GHPNMDPVLQ QGSLDLDSLA
ESPESDFMSA VNEFVIEENL ASPNPISEPI SPEMMVESLY SSVINAIDNK RMQDTTTLQR
EASKISELKD VLEKYQCAAE ESVCKFRVVK DDLRHLKSLV LKERSDFTLA INSLTTEVSS
AVGGVYQTHE MQLREQHRGE LLNLRQELEK QIHSLAEENQ VNQNIVRDVQ RAMLELEGLL
ERKEKELTQL ENEKERWLEK EGHLNERIKN LEQIISEQAE EIRMLSTLRD SLSSQLENLH
FEIERSQQKI RQEMEAASRC HLKELEDRLK EEHRTELETM SKDNKEALEH LAAENDAKSM
TSANHHAAAL QEKDAQIKDL EARLTELAEL RCKLEVELAL KESESEEARI HFEETKTQQA
DAMKTQVEAE TKTIREELAG LRKQLQAKNE EYEVDLAELR ALMRIEKDHC ISELVDRHEE
ETTLLHSNLS SLKQKLQDAK GSHAEQQQRL TDEFSQQIAE LTEEKEQQCK SFQALEQELR
TLIGNLRSEN DHLSKALKQE DSRKEEASNA AAADGFKELE QQKEEMERRL LDKIQQLEQD
EEGLSLHAES GADSGGPLSL DSALQERLQQ ERASLQIQME LLEKKKNEEM QNLKTSLIAE
QQTNFNTVLT REKMKKEQII SDLTEKLHKV TQQQEKDKAL IETLSEDRAS VMQEKKHLEE
ELNRLRSTVL ASSSMFTSAE AGAAAARALP VAETLADTSV GAMQDDEHVD SAVEASMVTV
QDSILSEEKQ RIILLERTLH MKEEENKRLS QRLVSPFSSL SAMSRHLHQG AVGDLVLIIL
DERHDNYVLF TVGPTLYFLH SESLTALDLK PASGTSRRPW VLGKVLEKEY CQAKKAQNRF
KVPLGTKFYR VKAVPWNRKV
//
