ID H2MWW6_ORYLA Unreviewed; 381 AA.
AC H2MWW6;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=SPT3 homolog, SAGA and STAGA complex component {ECO:0000313|Ensembl:ENSORLP00000023390.2};
GN Name=supt3h {ECO:0000313|Ensembl:ENSORLP00000023390.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000023390.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000023390.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000023390.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000023390.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000023390.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; H2MWW6; -.
DR STRING; 8090.ENSORLP00000023390; -.
DR Ensembl; ENSORLT00000023391.2; ENSORLP00000023390.2; ENSORLG00000018724.2.
DR eggNOG; KOG3902; Eukaryota.
DR GeneTree; ENSGT00390000010738; -.
DR HOGENOM; CLU_061312_1_0_1; -.
DR InParanoid; H2MWW6; -.
DR TreeFam; TF323574; -.
DR Proteomes; UP000001038; Chromosome 15.
DR Bgee; ENSORLG00000018724; Expressed in gastrula and 14 other cell types or tissues.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0003713; F:transcription coactivator activity; IBA:GO_Central.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd07978; TAF13; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR003195; TFIID_TAF13.
DR PANTHER; PTHR11380; TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED; 1.
DR PANTHER; PTHR11380:SF5; TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOG; 1.
DR Pfam; PF02269; TFIID-18kDa; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT REGION 257..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 271..291
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 381 AA; 43251 MW; 1AC3C3BE2C6100B8 CRC64;
MAASSTSKER QTSRNSFIPE LQSMMFALGD ARRPQHDTAA LVEDIVHTQL ITMLHQACEG
ATLRGSRVIS AEDILFLMRR DKRKMARLLK YLQFRDYKSK LLKSLEEEEL LQDAGPAAVG
SNQRRQRLAH DFLAWMDQTG ELLSLAERQE TDPVKQERME RLERQTRNMD PAQYTDFCES
RQLSFAKKAS KFRDWLDCSS LELKPNSIAM EVLSYLAYET VAQIVDLSLL VKQEMTCKTN
PVSHVISASY IHYSTHAEVK KDPDSPEATP PSTPGSLHSS KPLLQGNGSI DTRARQRKRK
KSAPVSVEPP SGAIQPCHIR EAIRRYSYRH TVRLHISLLE ISPTEQLFFC RAPTGGMGWL
SSPADFNTCI FLDFSLFNKN S
//
