ID H2NMQ4_PONAB Unreviewed; 585 AA.
AC H2NMQ4; A0A2J8RIP1; A0A6D2XFS4;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=PGBD4 isoform 1 {ECO:0000313|EMBL:PNJ08370.1};
DE SubName: Full=PiggyBac transposable element derived 4 {ECO:0000313|Ensembl:ENSPPYP00000007148.1};
GN Name=PGBD4 {ECO:0000313|Ensembl:ENSPPYP00000007148.1};
GN ORFNames=CR201_G0050715 {ECO:0000313|EMBL:PNJ08370.1};
OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9601 {ECO:0000313|Ensembl:ENSPPYP00000007148.1, ECO:0000313|Proteomes:UP000001595};
RN [1] {ECO:0000313|Ensembl:ENSPPYP00000007148.1, ECO:0000313|Proteomes:UP000001595}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Wilson R.K., Mardis E.;
RT "A 6x draft sequence assembly of the Pongo pygmaeus abelii genome.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PNJ08370.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Susie {ECO:0000313|EMBL:PNJ08370.1};
RA Pollen A., Hastie A., Hormozdiari F., Dougherty M., Liu R., Chaisson M.,
RA Hoppe E., Hill C., Pang A., Hillier L., Baker C., Armstrong J.,
RA Shendure J., Paten B., Wilson R., Chao H., Schneider V., Ventura M.,
RA Kronenberg Z., Murali S., Gordon D., Cantsilieris S., Munson K., Nelson B.,
RA Raja A., Underwood J., Diekhans M., Fiddes I., Haussler D., Eichler E.;
RT "High-resolution comparative analysis of great ape genomes.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSPPYP00000007148.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; NDHI03003689; PNJ08370.1; -; Genomic_DNA.
DR RefSeq; XP_009247936.1; XM_009249661.1.
DR STRING; 9601.ENSPPYP00000007148; -.
DR Ensembl; ENSPPYT00000007444.2; ENSPPYP00000007148.1; ENSPPYG00000006308.2.
DR GeneID; 103892481; -.
DR KEGG; pon:103892481; -.
DR CTD; 161779; -.
DR eggNOG; ENOG502QWHD; Eukaryota.
DR GeneTree; ENSGT00940000164464; -.
DR HOGENOM; CLU_013052_3_2_1; -.
DR OMA; SHINFRL; -.
DR OrthoDB; 3029107at2759; -.
DR TreeFam; TF328011; -.
DR Proteomes; UP000001595; Chromosome 15.
DR InterPro; IPR029526; PGBD.
DR InterPro; IPR032718; PGBD4_C_Znf-ribbon.
DR PANTHER; PTHR46599; PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4; 1.
DR PANTHER; PTHR46599:SF9; PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4; 1.
DR Pfam; PF13843; DDE_Tnp_1_7; 1.
DR Pfam; PF13842; Tnp_zf-ribbon_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001595}.
FT DOMAIN 103..468
FT /note="PiggyBac transposable element-derived protein"
FT /evidence="ECO:0000259|Pfam:PF13843"
FT DOMAIN 539..575
FT /note="PiggyBac transposable element-derived protein 4 C-
FT terminal zinc-ribbon"
FT /evidence="ECO:0000259|Pfam:PF13842"
FT REGION 1..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..43
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 59..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 585 AA; 66938 MW; 2796748061C2A168 CRC64;
MSNPRKRSIP MRDGNTGLEQ LLAEDSFDES DFSEIDDSDN FSDSALEDDK IRPLSHLESA
GKSPTSSDSG RSMKWSARAM IPRQRYDFTG TPGRKVDVSD ITDPLQYFEL FFTEELVSKI
TRETNAQAAL LASKPPGPKG FSRMDKWKDT DNDELKVFFA VMLLQGIVQK PELEMFWSTR
PLLDTPYLRQ IMTGERFLLL FRCLHFVNNS SISAGQSKAQ ISLQKIKPVF DFLVNKFSTV
YTPNRNIAVD ESLMLFKGPL AMKQYLPTKR VRFGLKLYVL CESQSGYVWN ALVHTGPGMN
LKDSADGLKS SRIVLTLVND LLGQGYCVFL DNFNISPMLF RELHQNRTDA VGTAHLNRKQ
IPNDLKKRIA KGTTVARFCG ELMALKWCDG KEVTMLSTFH NDTVIEVNNR NGKKTKKPRV
IVDYNENMGA VDSADQMLTS YPSERKRHKV WYKKFFHHLL HITVLNSYIL FKKDNPEHTM
SHINFRLALI ERMLEKHHKP GQQHLRGRPC SDDVTPLRLS GRHFPKSIPA TSGKQNPTGR
CKICCSQYDK DGKKIRKETR YFCAECDVPL CVVPCFEIYH TKKDY
//