ID H2RYJ6_TAKRU Unreviewed; 969 AA.
AC H2RYJ6;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 3.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Patched domain containing 1 {ECO:0000313|Ensembl:ENSTRUP00000005217.3};
GN Name=PTCHD1 {ECO:0000313|Ensembl:ENSTRUP00000005217.3};
OS Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu.
OX NCBI_TaxID=31033 {ECO:0000313|Ensembl:ENSTRUP00000005217.3, ECO:0000313|Proteomes:UP000005226};
RN [1] {ECO:0000313|Ensembl:ENSTRUP00000005217.3, ECO:0000313|Proteomes:UP000005226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551351;
RA Kai W., Kikuchi K., Tohari S., Chew A.K., Tay A., Fujiwara A., Hosoya S.,
RA Suetake H., Naruse K., Brenner S., Suzuki Y., Venkatesh B.;
RT "Integration of the genetic map and genome assembly of fugu facilitates
RT insights into distinct features of genome evolution in teleosts and
RT mammals.";
RL Genome Biol. Evol. 3:424-442(2011).
RN [2] {ECO:0000313|Ensembl:ENSTRUP00000005217.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
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DR AlphaFoldDB; H2RYJ6; -.
DR STRING; 31033.ENSTRUP00000005217; -.
DR Ensembl; ENSTRUT00000005248.3; ENSTRUP00000005217.3; ENSTRUG00000002271.3.
DR eggNOG; KOG1934; Eukaryota.
DR GeneTree; ENSGT00940000157080; -.
DR InParanoid; H2RYJ6; -.
DR OMA; KAPQFAH; -.
DR OrthoDB; 2876883at2759; -.
DR TreeFam; TF331806; -.
DR Proteomes; UP000005226; Chromosome 10.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796:SF36; PATCHED DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000005226};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 303..322
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 334..354
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 366..387
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 407..429
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 441..463
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 584..603
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 325..463
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
SQ SEQUENCE 969 AA; 107280 MW; 0194CB1AE1614EE1 CRC64;
MLGGARGFSG RWESLEPRPR ARMLRQVLHA GLRTSFHALG RFVASHPVFF ASAPVLLSIL
LGASFSRYRV EEDVESLLAP KHSLAKIEGN LVESLFPVNR SKHALYSDLQ TPGRYGRVII
TARKGSVLDP VHLDTILTLH SQIYQMQVTV PTSAFNYSFS YLCLHDEKNA CIIDDIIRAM
EEIQSARSTN GSVPVLHYPI TQLADGRQAY IGHQLGGVQG WGPGGSVHGP RAGARGEGVR
SARALQLTYY LQARGDLMDR VASQWEKAFC AELENFAALH PKLGLYPSTS SSLKMDFQFS
SVLARRPLLA SLGLCGVLAV LCCSMRDCVR SKPWLGLLAL LSVTLSGLTA AGILNLTGAT
YNSTYLGIPF VMLGHGLFGS FEMLSSWRRT REDQHVKERV ASVFEDVMLR FSGSTLIHLM
TLGLAASPLT NMEAVRLFCR TAALAVTISY IYMLSFYGSC LVFTGYLETG YRHGCFCRRV
PKPDRLDSKP AWYRCLMYTR YQEETQNHQP PGVGHGSVPI TNLTHTHTTH HPAALGHSCP
AANSTHPQPH SSGGDPHPQD SHLLLGCVRH CFGDWITNTY VKPFVVLLYL VYISFGLMGF
LQVTQGSDPS ALVAMDTATV LYTRAQQRYF SSYSPVIGFY IYESAPYWND SVQQDLLEYA
KGFQRISWLE AYLNYLSDRN QSTSQPRENF TRTLRQAFLR EPQFAHFADD IIFAERGQGE
EPDLAASRIF LVAKTTENKR EEMSLLLDTL RRLSLTSRVR FLIFNPSFVY LDRYAAAVSS
PLRHSLLAVL FLLGLSSLAI VEPLVSVWLG LTLLSVQFGV LGFMTLWGVE LDCMSVLCLI
SALGHSADCS GPLLCGFASG RGDSRTRWVR VALERHGVPS LQTLLCYSVA LVPVGSVRSN
LTHTLFRCLT LTAGCSALHT LAFLPTLLTF LPPSKTRGPR QEGEGQRQAV ECVEMNDSNT
RVVDQITTV
//