ID H2Y648_CIOSA Unreviewed; 869 AA.
AC H2Y648;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=Thrombospondin-like N-terminal domain-containing protein {ECO:0000259|SMART:SM00210};
OS Ciona savignyi (Pacific transparent sea squirt).
OC Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
OC Cionidae; Ciona.
OX NCBI_TaxID=51511 {ECO:0000313|Ensembl:ENSCSAVP00000000796.1, ECO:0000313|Proteomes:UP000007875};
RN [1] {ECO:0000313|Proteomes:UP000007875}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Birren B., Nusbaum C., Abebe A., Abouelleil A., Adekoya E., Ait-zahra M.,
RA Allen N., Allen T., An P., Anderson M., Anderson S., Arachchi H.,
RA Armbruster J., Bachantsang P., Baldwin J., Barry A., Bayul T.,
RA Blitshsteyn B., Bloom T., Blye J., Boguslavskiy L., Borowsky M.,
RA Boukhgalter B., Brunache A., Butler J., Calixte N., Calvo S., Camarata J.,
RA Campo K., Chang J., Cheshatsang Y., Citroen M., Collymore A., Considine T.,
RA Cook A., Cooke P., Corum B., Cuomo C., David R., Dawoe T., Degray S.,
RA Dodge S., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A.,
RA Elkins T., Engels R., Erickson J., Farina A., Faro S., Ferreira P.,
RA Fischer H., Fitzgerald M., Foley K., Gage D., Galagan J., Gearin G.,
RA Gnerre S., Gnirke A., Goyette A., Graham J., Grandbois E., Gyaltsen K.,
RA Hafez N., Hagopian D., Hagos B., Hall J., Hatcher B., Heller A.,
RA Higgins H., Honan T., Horn A., Houde N., Hughes L., Hulme W., Husby E.,
RA Iliev I., Jaffe D., Jones C., Kamal M., Kamat A., Kamvysselis M.,
RA Karlsson E., Kells C., Kieu A., Kisner P., Kodira C., Kulbokas E.,
RA Labutti K., Lama D., Landers T., Leger J., Levine S., Lewis D., Lewis T.,
RA Lindblad-toh K., Liu X., Lokyitsang T., Lokyitsang Y., Lucien O., Lui A.,
RA Ma L.J., Mabbitt R., Macdonald J., Maclean C., Major J., Manning J.,
RA Marabella R., Maru K., Matthews C., Mauceli E., Mccarthy M., Mcdonough S.,
RA Mcghee T., Meldrim J., Meneus L., Mesirov J., Mihalev A., Mihova T.,
RA Mikkelsen T., Mlenga V., Moru K., Mozes J., Mulrain L., Munson G.,
RA Naylor J., Newes C., Nguyen C., Nguyen N., Nguyen T., Nicol R., Nielsen C.,
RA Nizzari M., Norbu C., Norbu N., O'donnell P., Okoawo O., O'leary S.,
RA Omotosho B., O'neill K., Osman S., Parker S., Perrin D., Phunkhang P.,
RA Piqani B., Purcell S., Rachupka T., Ramasamy U., Rameau R., Ray V.,
RA Raymond C., Retta R., Richardson S., Rise C., Rodriguez J., Rogers J.,
RA Rogov P., Rutman M., Schupbach R., Seaman C., Settipalli S., Sharpe T.,
RA Sheridan J., Sherpa N., Shi J., Smirnov S., Smith C., Sougnez C.,
RA Spencer B., Stalker J., Stange-thomann N., Stavropoulos S., Stetson K.,
RA Stone C., Stone S., Stubbs M., Talamas J., Tchuinga P., Tenzing P.,
RA Tesfaye S., Theodore J., Thoulutsang Y., Topham K., Towey S., Tsamla T.,
RA Tsomo N., Vallee D., Vassiliev H., Venkataraman V., Vinson J., Vo A.,
RA Wade C., Wang S., Wangchuk T., Wangdi T., Whittaker C., Wilkinson J.,
RA Wu Y., Wyman D., Yadav S., Yang S., Yang X., Yeager S., Yee E., Young G.,
RA Zainoun J., Zembeck L., Zimmer A., Zody M., Lander E.;
RL Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSCSAVP00000000796.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H2Y648; -.
DR Ensembl; ENSCSAVT00000000805.1; ENSCSAVP00000000796.1; ENSCSAVG00000000450.1.
DR GeneTree; ENSGT00940000164160; -.
DR Proteomes; UP000007875; Unassembled WGS sequence.
DR Gene3D; 2.60.120.200; -; 1.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR048287; TSPN-like_N.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF1082; COLLAGEN ALPHA-1(X) CHAIN; 1.
DR Pfam; PF01391; Collagen; 5.
DR SMART; SM00210; TSPN; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007875};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 4..198
FT /note="Thrombospondin-like N-terminal"
FT /evidence="ECO:0000259|SMART:SM00210"
FT REGION 216..708
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 737..846
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 284..304
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 869 AA; 85554 MW; 903E08474FA1FCC2 CRC64;
DQSGFDLISA FKLEESSLDG AEVKKVKGSI PGYDAYQLTD SPAISTGDVF GKGLPDQYVF
ASTFRLNART SKKIWSIMKI VDAGGIHNLT INILYPQKSI DFIGLGLDRH TTSSKFKARK
FPKVAKLFDK NFHKHYVTQV GSVTLFIDCE KIGTRRMKQK ANEIGIGGTT FLGRTRLYPI
TPNPSQFEIQ SIKLYCEVDS ADKAELNCCE LPHRRDNTVS ERGLPGNDGS DGVKGEAGSD
GIPGDDGLPG QPGAPGGRGD RGNTGAKGER GELGVRGTPG KDGDEGPPGP PGGPPGPPGR
PGNPGLPGKD GADGQDGSKG GQGETGLRGF PGEMGRKGDV GPIGPPGAKG STGLEGLPGL
MGEHGGIPGM DGLDGAKGST GAPGLAGAVG APGKDGPGGP EGPRGPPGFP GPRGERGSTG
EVGPIGSPGD MGPPPGEQGI PGEMGAKGVS GEVGAKGNSG EKGATGEKGA RGANGIPGEI
GRQGEPGIDG KNGVKGQQGS PGVMGSKGEM GDMGMPGMPG LLGPRGPTGS KGAPGDSGER
GAPGLVGARG EPGEDGLKAP GLPGISGERG FPGLRGQTGP RGIDGTPGKM GSRGSPGPPG
VDGTPGSNGG KGAKGEAGAD GTPGRPGAAG QKGSAGAAGV DGKDGSPGPM GPDGFPGERG
GRGPRGFQGL PGLNGMKGST GASGPTGPQG KKGKPGKDGS PGKSAPMKDM EKMVERVVNR
VLDNIIPDLL QNLRDQSAIE GRPGPPGAPG KDGSPGEHGP QGIAGPHGRP GARGATGPAG
ASGPPGEPGE RGRPGIGRRG ARGKPGASGV QGPPGVGRAG VPGAPGTQGP AGTPGPAGPE
GQRGAKGVCD VTQCYQTAER AAMNMIPQP
//
