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Database: UniProt
Entry: H2YW17_CIOSA
LinkDB: H2YW17_CIOSA
Original site: H2YW17_CIOSA 
ID   H2YW17_CIOSA            Unreviewed;      1151 AA.
AC   H2YW17;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   RecName: Full=SMC hinge domain-containing protein {ECO:0000259|SMART:SM00968};
OS   Ciona savignyi (Pacific transparent sea squirt).
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
OC   Cionidae; Ciona.
OX   NCBI_TaxID=51511 {ECO:0000313|Ensembl:ENSCSAVP00000009528.1, ECO:0000313|Proteomes:UP000007875};
RN   [1] {ECO:0000313|Proteomes:UP000007875}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Birren B., Nusbaum C., Abebe A., Abouelleil A., Adekoya E., Ait-zahra M.,
RA   Allen N., Allen T., An P., Anderson M., Anderson S., Arachchi H.,
RA   Armbruster J., Bachantsang P., Baldwin J., Barry A., Bayul T.,
RA   Blitshsteyn B., Bloom T., Blye J., Boguslavskiy L., Borowsky M.,
RA   Boukhgalter B., Brunache A., Butler J., Calixte N., Calvo S., Camarata J.,
RA   Campo K., Chang J., Cheshatsang Y., Citroen M., Collymore A., Considine T.,
RA   Cook A., Cooke P., Corum B., Cuomo C., David R., Dawoe T., Degray S.,
RA   Dodge S., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A.,
RA   Elkins T., Engels R., Erickson J., Farina A., Faro S., Ferreira P.,
RA   Fischer H., Fitzgerald M., Foley K., Gage D., Galagan J., Gearin G.,
RA   Gnerre S., Gnirke A., Goyette A., Graham J., Grandbois E., Gyaltsen K.,
RA   Hafez N., Hagopian D., Hagos B., Hall J., Hatcher B., Heller A.,
RA   Higgins H., Honan T., Horn A., Houde N., Hughes L., Hulme W., Husby E.,
RA   Iliev I., Jaffe D., Jones C., Kamal M., Kamat A., Kamvysselis M.,
RA   Karlsson E., Kells C., Kieu A., Kisner P., Kodira C., Kulbokas E.,
RA   Labutti K., Lama D., Landers T., Leger J., Levine S., Lewis D., Lewis T.,
RA   Lindblad-toh K., Liu X., Lokyitsang T., Lokyitsang Y., Lucien O., Lui A.,
RA   Ma L.J., Mabbitt R., Macdonald J., Maclean C., Major J., Manning J.,
RA   Marabella R., Maru K., Matthews C., Mauceli E., Mccarthy M., Mcdonough S.,
RA   Mcghee T., Meldrim J., Meneus L., Mesirov J., Mihalev A., Mihova T.,
RA   Mikkelsen T., Mlenga V., Moru K., Mozes J., Mulrain L., Munson G.,
RA   Naylor J., Newes C., Nguyen C., Nguyen N., Nguyen T., Nicol R., Nielsen C.,
RA   Nizzari M., Norbu C., Norbu N., O'donnell P., Okoawo O., O'leary S.,
RA   Omotosho B., O'neill K., Osman S., Parker S., Perrin D., Phunkhang P.,
RA   Piqani B., Purcell S., Rachupka T., Ramasamy U., Rameau R., Ray V.,
RA   Raymond C., Retta R., Richardson S., Rise C., Rodriguez J., Rogers J.,
RA   Rogov P., Rutman M., Schupbach R., Seaman C., Settipalli S., Sharpe T.,
RA   Sheridan J., Sherpa N., Shi J., Smirnov S., Smith C., Sougnez C.,
RA   Spencer B., Stalker J., Stange-thomann N., Stavropoulos S., Stetson K.,
RA   Stone C., Stone S., Stubbs M., Talamas J., Tchuinga P., Tenzing P.,
RA   Tesfaye S., Theodore J., Thoulutsang Y., Topham K., Towey S., Tsamla T.,
RA   Tsomo N., Vallee D., Vassiliev H., Venkataraman V., Vinson J., Vo A.,
RA   Wade C., Wang S., Wangchuk T., Wangdi T., Whittaker C., Wilkinson J.,
RA   Wu Y., Wyman D., Yadav S., Yang S., Yang X., Yeager S., Yee E., Young G.,
RA   Zainoun J., Zembeck L., Zimmer A., Zody M., Lander E.;
RL   Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSCSAVP00000009528.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC       Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the SMC family. SMC1 subfamily.
CC       {ECO:0000256|ARBA:ARBA00005597}.
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DR   AlphaFoldDB; H2YW17; -.
DR   Ensembl; ENSCSAVT00000009645.1; ENSCSAVP00000009528.1; ENSCSAVG00000005597.1.
DR   GeneTree; ENSGT00940000155614; -.
DR   Proteomes; UP000007875; Unassembled WGS sequence.
DR   GO; GO:0008278; C:cohesin complex; IEA:InterPro.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
DR   CDD; cd03275; ABC_SMC1_euk; 1.
DR   Gene3D; 1.20.1060.20; -; 1.
DR   Gene3D; 3.30.70.1620; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003395; RecF/RecN/SMC_N.
DR   InterPro; IPR024704; SMC.
DR   InterPro; IPR028468; Smc1_ABC.
DR   InterPro; IPR010935; SMC_hinge.
DR   InterPro; IPR036277; SMC_hinge_sf.
DR   PANTHER; PTHR18937:SF12; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR   PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR   Pfam; PF06470; SMC_hinge; 1.
DR   Pfam; PF02463; SMC_N; 1.
DR   PIRSF; PIRSF005719; SMC; 1.
DR   SMART; SM00968; SMC_hinge; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF75553; Smc hinge domain; 1.
PE   3: Inferred from homology;
KW   Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007875}.
FT   DOMAIN          486..605
FT                   /note="SMC hinge"
FT                   /evidence="ECO:0000259|SMART:SM00968"
FT   REGION          390..420
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          154..205
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          242..287
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          426..453
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          797..866
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          925..980
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        402..420
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1151 AA;  135197 MW;  460387D3137CE5D5 CRC64;
     LESIEVENFK SYRGKILIPF KKFTAIIGPN GSGKSNLMDA ISFVLGEKTS SLRVKKLSDL
     IHGAPIGKPI SNRARVTATY CTESGEKMEF SRSIKSENRI NDKVVTHAEY NKEMEKINIF
     IKVKNFLVFQ GQVESIAMKN PKERTQLFEE ISGSGEFKED YEKAKSEMTK AEQETQYSFH
     RKKGIAAERK EAKQEKDEAD KYRKLRDDFS NLRLQLMLFK LFYSEREIEA ITDETEGKNK
     DIRHHLRKRE KYEEEIKKKK QEQGKFMREL SALEKKIQEK ETELNRKRPM YIKCISVPYA
     HTAKENTNFV MKKIESAKKS LRTAENRHES HMHVIQDLQK QLEEIEEKRR DQNEGRDLEL
     EESQITEYNR LKEEAAKRST ALNTEIEKLQ REQQTDQENE LWSQQKQKKK ELEESSSRVE
     KLRDYIETSR NTLQEHKKLK VELEQQINIE LEEVMKKQGD AKVDRTESSR QKRRLELLET
     LRRLFPGVYG RVLDQCEPVH NRYKIAITKV LGKYMYAIVC DTEKTARDCI QYMKEQCAEP
     ETFLPLDYID AKPINDQLRE IKEPRGVKLV IDVIKYELPA IKRALQFTCG NSLVCENADD
     ARKVAFGQVQ RHKAVALDGT LFQKSGVISG GATDLKRKAQ RWDEKVLDHL QSRKEKLTEE
     LKQGWWALGV FKIEELDHLL QDFEPRFMEV EERMRSREGE INNYRASMNE VRCASDQVFR
     NFCVLIGVPN IRVYEERELR RQQETLKKRL EFDNQKSRVT NQLEYENSLD THQNVVKWQE
     MIRNDEANID LHKREEKKAM KDELQEVKTR KIQKRRDCDE KTSEIEDVRK DLGKLNKEMT
     HFQKVITAQE LKMEQKREQK HSLLQQCKME DIPLPLKKGA IEDIDESVNI KFIFVLSVCH
     RQAAMEIDYR KLPHDLKVLK PHLELDEVKR EGERLQSRMN EVSSTIQRFS APNMKALSHL
     DEVKKQYHES KDQFDSFRKR ARKLRQDFEM VKKKRVEHFN QCFDYVATKI DDIYKDLSRN
     NSAQAFLGPE NTEEPYLEEA PHTTAWPLGN RFRPMDNLSG GEKTVAALAL IFAIHDYQPS
     PFFVLDEIDA ALDNTNIGKV AEYIKQMSNR VQCIVISLKE EFYNRVDALV GIYPQVNHMI
     ALSGCQLKTG R
//
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