ID H3A436_LATCH Unreviewed; 201 AA.
AC H3A436;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=Transcription factor COE DNA-binding domain-containing protein {ECO:0000259|Pfam:PF16422};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000004407.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000004407.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU004489}.
CC -!- SIMILARITY: Belongs to the COE family. {ECO:0000256|RuleBase:RU004489}.
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DR EMBL; AFYH01162999; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163000; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163001; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163002; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163003; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163004; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163005; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163006; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163007; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01163008; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3A436; -.
DR STRING; 7897.ENSLACP00000004407; -.
DR Ensembl; ENSLACT00000004445.1; ENSLACP00000004407.1; ENSLACG00000003919.1.
DR eggNOG; KOG3836; Eukaryota.
DR GeneTree; ENSGT00950000182859; -.
DR HOGENOM; CLU_1424537_0_0_1; -.
DR InParanoid; H3A436; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000003919; Expressed in mesonephros and 3 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.60.40.3180; Transcription factor COE1, DNA-binding domain; 2.
DR InterPro; IPR032200; COE_DBD.
DR InterPro; IPR038173; COE_DBD_sf.
DR InterPro; IPR003523; Transcription_factor_COE.
DR PANTHER; PTHR10747; TRANSCRIPTION FACTOR COE FAMILY MEMBER; 1.
DR PANTHER; PTHR10747:SF38; TRANSCRIPTION FACTOR COLLIER; 1.
DR Pfam; PF16422; COE1_DBD; 2.
PE 3: Inferred from homology;
KW Developmental protein {ECO:0000256|RuleBase:RU004489};
KW DNA-binding {ECO:0000256|RuleBase:RU004489};
KW Metal-binding {ECO:0000256|RuleBase:RU004489};
KW Nucleus {ECO:0000256|RuleBase:RU004489};
KW Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW Transcription {ECO:0000256|RuleBase:RU004489};
KW Transcription regulation {ECO:0000256|RuleBase:RU004489};
KW Zinc {ECO:0000256|RuleBase:RU004489};
KW Zinc-finger {ECO:0000256|RuleBase:RU004489}.
FT DOMAIN 9..84
FT /note="Transcription factor COE DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF16422"
FT DOMAIN 153..201
FT /note="Transcription factor COE DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF16422"
FT REGION 109..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 201 AA; 22953 MW; D28C9428F6893D80 CRC64;
MKEEPLSGGL TQVRSWIQGA GILDASTAAQ SGISLARAHF EKQPPSNLRK SNFFHFVLAL
YDRQGQPVEI ERTSFIDFVE KDRKGLLVYP AVSTWKPLLG SERIGEKTKK QTLPGIGEDR
RKNKETNSSW DRRGSEKKQR RQCSRTRLVL GLIIFFLSSQ ELNGEKTNNG IHYRLQLLYS
NGIRTEQNLY VRLIDSMSKQ V
//