ID H3ASQ9_LATCH Unreviewed; 706 AA.
AC H3ASQ9;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Pentatricopeptide repeat domain 1 {ECO:0000313|Ensembl:ENSLACP00000012680.1};
GN Name=PTCD1 {ECO:0000313|Ensembl:ENSLACP00000012680.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000012680.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000012680.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AFYH01039299; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01039300; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3ASQ9; -.
DR STRING; 7897.ENSLACP00000012680; -.
DR Ensembl; ENSLACT00000012774.1; ENSLACP00000012680.1; ENSLACG00000011172.1.
DR eggNOG; KOG4197; Eukaryota.
DR GeneTree; ENSGT00940000153974; -.
DR HOGENOM; CLU_021952_0_0_1; -.
DR InParanoid; H3ASQ9; -.
DR OMA; YALQVWQ; -.
DR TreeFam; TF324792; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000011172; Expressed in post-anal tail muscle and 6 other cell types or tissues.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR24014; 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2; 1.
DR PANTHER; PTHR24014:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008672}.
FT REPEAT 185..219
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 531..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 684..706
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 686..706
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 706 AA; 81125 MW; 5DFA9082E5C8667E CRC64;
MSLLKVLQPQ CYKRHFSFRL SYSLQYRGTS PPKHLSLCLR KADHIALLHR ALLPWPLHHW
QSRALNLSWA LQNLQTTDEQ CVKKVSPENT LAHKVEDDEM VDDFGTLSRS FSSRKVFHKT
SPEFQNLEHE NAEEDEEVMK PRRGRRNTPY WYFLQCKSLI KEDKLAEALD LFEIRMLKED
RLQPEEYNYT ILIGGCGRAG YVKKALKLYN DMKKRGLEPT DATYTGLFNA CAESPWKDSG
LQHAEKLRQQ LQNKNVQLNL ITYHALLKTY AMCSDLRACF DVLKEIVQQG HIITQETFNF
LLMSCIKDKV NGFRYSIQIW RKMFLLGIKP DAYSYNLLLR ATRDCGIGDI AVASSLLLQM
EERPQFKPKA GIRRAQKVGG HKGKQADKAV ATAVNVEYLE RELFLEVSTE AVKKSKHKID
TQDLSPLNRS HILPIERDPN KHAVTNSDTR LPNLLNPYNT NKNIVSLGTV AMPADRLALI
GNLNGFLDKM REDGLVPDIK TFTLLAEIVE SGSESESSLL ALVEEHKIKA DLSFFNTLIR
KKSRLGDLEA AKALLPVLVE CGLAPNLHTF CNLALACRKQ KNGLQLLTDM QMSGVTPNAH
IYSTLINAAV KQLDYVYLTE ILKDMKRTWV PPNEVILRQL EFAAQYPPKY DRYKSKNTYL
EKIDGFRGYY HRWLKSMPGA ETPHPWEKYR TPKQETNQPE MSKRDH
//
