ID H3BDY6_LATCH Unreviewed; 548 AA.
AC H3BDY6;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=IF rod domain-containing protein {ECO:0000259|PROSITE:PS51842};
GN Name=LOC102348948 {ECO:0000313|Ensembl:ENSLACP00000020107.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000020107.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000020107.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
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DR EMBL; AFYH01001326; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01001327; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01001328; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3BDY6; -.
DR STRING; 7897.ENSLACP00000020107; -.
DR Ensembl; ENSLACT00000020245.1; ENSLACP00000020107.1; ENSLACG00000017672.2.
DR eggNOG; ENOG502QURK; Eukaryota.
DR GeneTree; ENSGT00940000161090; -.
DR HOGENOM; CLU_012560_6_1_1; -.
DR InParanoid; H3BDY6; -.
DR OMA; FHGATIT; -.
DR TreeFam; TF317854; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000017672; Expressed in pelvic fin and 5 other cell types or tissues.
DR GO; GO:0045095; C:keratin filament; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR032444; Keratin_2_head.
DR InterPro; IPR003054; Keratin_II.
DR PANTHER; PTHR45616; GATA-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45616:SF21; KERATIN, TYPE II CYTOSKELETAL 7; 1.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF16208; Keratin_2_head; 1.
DR PRINTS; PR01276; TYPE2KERATIN.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 3.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Reference proteome {ECO:0000313|Proteomes:UP000008672}.
FT DOMAIN 132..444
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT COILED 136..276
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 342..422
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 548 AA; 60522 MW; F22901740183EAF7 CRC64;
MSTYSITTKK VARSSATPRF SSLSSIAPGS ARISKSSFTT GSSIGGSRYG GGYGGGYGGG
YGSGIDGGYG SNIIYNGSAA GFGYGNGAAA SLGAGYGGVS QAPITAVTLN RSLLAPLNLE
IDPKIQMVRT EEKEQIKTLN NRFASFIDKV RFLEQQNKML ETKWQLLQNQ GPAGKSNLDA
MFEAYINNLR RQKDVLGQEK NRLENELHGM QGTVEDFKNK YEDEINKRTE LENEFVLIKK
DVDEAYINKV ELEAKLESLT DEINFLRQLY DEELRELQAQ VKDTSVIVEM NNSRNLDMDG
ILAEVKAYYD QLANSSRKET ETYYETKIKE ITASAGHHGD ELRNTKQEIN EMSRCISRFQ
SEIENMKGQR AKLEADIAEA EEKGELAIRD AKDKIAELEA ALQKAKQNMA QMIREYQDLM
NVKLALDIEI ATYRKLLEGE ESRYCSHFQG LLLSHDCWHY VAHSSESASS LYNKSRQMTT
MGGWACGYSM NAGYGGMGRI AASGGSGYGT SFSSSPYTSS SPVPRNMLVK VTEFTDGNVV
SSSTRQLP
//
