GenomeNet

Database: UniProt
Entry: H3CAW2_TETNG
LinkDB: H3CAW2_TETNG
Original site: H3CAW2_TETNG 
ID   H3CAW2_TETNG            Unreviewed;       550 AA.
AC   H3CAW2;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=Synaptotagmin binding, cytoplasmic RNA interacting protein {ECO:0000313|Ensembl:ENSTNIP00000005384.1};
OS   Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS   nigroviridis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX   NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000005384.1, ECO:0000313|Proteomes:UP000007303};
RN   [1] {ECO:0000313|Proteomes:UP000007303}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15496914; DOI=10.1038/nature03025;
RA   Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA   Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA   Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA   Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA   Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA   Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA   Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA   McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA   Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA   Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA   Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT   "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT   early vertebrate proto-karyotype.";
RL   Nature 431:946-957(2004).
RN   [2] {ECO:0000313|Ensembl:ENSTNIP00000005384.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; H3CAW2; -.
DR   STRING; 99883.ENSTNIP00000005384; -.
DR   Ensembl; ENSTNIT00000005530.1; ENSTNIP00000005384.1; ENSTNIG00000002821.1.
DR   GeneTree; ENSGT00940000153511; -.
DR   HOGENOM; CLU_022960_2_1_1; -.
DR   InParanoid; H3CAW2; -.
DR   OMA; GNMASEH; -.
DR   TreeFam; TF314932; -.
DR   Proteomes; UP000007303; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd21066; NURR_hnRNPQ; 1.
DR   CDD; cd12495; RRM3_hnRNPQ; 1.
DR   Gene3D; 3.30.70.330; -; 3.
DR   InterPro; IPR041337; hnRNP_Q_AcD.
DR   InterPro; IPR006535; HnRNP_R/Q_splicing_fac.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   NCBIfam; TIGR01648; hnRNP-R-Q; 1.
DR   PANTHER; PTHR21245; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; 1.
DR   PANTHER; PTHR21245:SF11; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q; 1.
DR   Pfam; PF18360; hnRNP_Q_AcD; 1.
DR   Pfam; PF00076; RRM_1; 3.
DR   SMART; SM00360; RRM; 3.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR   PROSITE; PS50102; RRM; 3.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176}.
FT   DOMAIN          191..270
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          272..354
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          367..437
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          468..550
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   550 AA;  60078 MW;  1E4531245C6D2E03 CRC64;
     SEASRQKGRL PGWSVMVMLS ICPAQMSGEM ATDHVNGNGT EEPMDTTAAA NRSEHFPALL
     EAGLPQNVAE KLDGLYVAGL VAHSDLDERA IEALKEFNEE GALQVLVQFK ESDLSHVQNK
     SAFLCGVMKT YRQREKQGTK VSDSSKGPDE AKIKALLDRT EYTLDVTTGQ RKYGGPPPES
     VYTGAQPPVG TEIFVGKIPR DLFEDELVPL FEKAGPIWDL RLMMDPLSGL NRGYAFVTFC
     SKEAAQEAVK LCNNHEIRPG KQIGVCISVA NNRLFVGSIP KSKTKEQIVE EFSKVTEGLS
     DVILYLQPQD KSKNRGFCFL EYEDHKTAAQ ARRRLMSGKV KVWGNMVTVE WADPMEDPDP
     EVMAKVKVLF VRNLANSVTE EILEKAFSEY GNLERVKKLK DYAFIHFEER DGAVKALEEL
     NGKELEGEPI EIVFAKPPDQ KRKERKAQRQ AAKTQMYDDY YYYPPPHMPP PGGYTYPPNR
     GARGGASPAR GRGGAGAPRG RANFSQRGGA GPSRGGRGTR GGGGGGGGVA MQPRGRGGAL
     GLQAGPDASP
//
DBGET integrated database retrieval system