ID H3CAY6_TETNG Unreviewed; 858 AA.
AC H3CAY6;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Pogo transposable element derived with ZNF domain a {ECO:0008006|Google:ProtNLM};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000005408.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000005408.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H3CAY6; -.
DR STRING; 99883.ENSTNIP00000005408; -.
DR Ensembl; ENSTNIT00000005554.1; ENSTNIP00000005408.1; ENSTNIG00000002843.1.
DR GeneTree; ENSGT00940000163854; -.
DR HOGENOM; CLU_002015_1_0_1; -.
DR InParanoid; H3CAY6; -.
DR TreeFam; TF331707; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR24388; ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR24388:SF69; ZINC FINGER PROTEIN PLAG1; 1.
DR Pfam; PF03184; DDE_1; 1.
DR SMART; SM00355; ZnF_C2H2; 6.
DR PROSITE; PS51253; HTH_CENPB; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 4.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 28..55
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 525..593
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 229..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 858 AA; 95817 MW; 574099F600702D22 CRC64;
MVEDFYYGST PQAPPSPQSA APKPAGPYSC IHCRKTLSCN IRLMGHMQEH VSNMSLPGQR
PMCPHCFRFY PSPFQLRCHI EAVHQPAEQP AGTCRICELT FADEPEFLQH MKHTHRPGEM
PYVCQASPSV CDFRSSFYSE LWSHFEQFHA NMDCFLCRYC LRVLQGSTCY QQHFSIHQMK
VTYSCAKCRL HFLYNKERLE HGRLHHRTHL RPAQLSGIKP GTKVTVRTYS ETRAPEDQEK
SGSAAPCRPG QVAPPSSSIQ LTDTAHHPHL LLCSRPADPV SPQRCLECLS YFQDSRSHFP
SLVHCSLCRF TTCCSVAYAN HMIRRKPRYN SIFQSDPRLR QTLRCTACTL TTHRGDVMAN
HLTERRGHGC LLPTPGGTPS PLELLSLFSS DSLVSLICRS LTWELQVCQG SSLGGHHGNL
WRDPLGCVCL LSARVLPAPL SFSCSPAMTV EFLGPPPQVS SPAPLRPTPA STTITDDDAV
SPQRDGSALL SFQQRAVCSA LLHGVSQASR RYRTPAQKIH AWIQQQRQRW SQTWFWSTEK
LAEWLLLQRE QQLAVSEETL LQAAKEALGE SSRCARYGWL LDFLLRHRLG WNRCAPGRGQ
RPCGSLPRST VENSPGPTDH VTFQIRGRAP HLVAAMDEIP IFLNPELLEQ QEASALRLWG
SASEPWTFSV LLSALSDGSL LPPLLLCRGA PCRIPEGFPD NVLLEARPEG FSDQDCQDVW
INKVWQPHTS ARGSSLHLLM ADVHRGHVSA AFRTRLGSLG TSLLFIPSGC SSCVQPLDVC
VTPVLQDFLQ VSPPCLLLLL LLLLLLLLTQ PCAALQARWN QLLSQGGLEA LDQLALTLAC
WLSELSSILN AETHFLRR
//