ID H3CEP6_TETNG Unreviewed; 585 AA.
AC H3CEP6;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=Pre-mRNA 3'-end-processing factor FIP1 {ECO:0000256|ARBA:ARBA00017456};
DE AltName: Full=FIP1-like 1 protein {ECO:0000256|ARBA:ARBA00031816};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000006720.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000006720.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the FIP1 family.
CC {ECO:0000256|ARBA:ARBA00007459}.
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DR AlphaFoldDB; H3CEP6; -.
DR STRING; 99883.ENSTNIP00000006720; -.
DR Ensembl; ENSTNIT00000006871.1; ENSTNIP00000006720.1; ENSTNIG00000004104.1.
DR GeneTree; ENSGT00940000162578; -.
DR HOGENOM; CLU_035577_1_0_1; -.
DR InParanoid; H3CEP6; -.
DR OMA; YYPRRED; -.
DR TreeFam; TF318610; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR007854; Fip1_dom.
DR PANTHER; PTHR13484; FIP1-LIKE 1 PROTEIN; 1.
DR PANTHER; PTHR13484:SF9; PRE-MRNA 3'-END-PROCESSING FACTOR FIP1; 1.
DR Pfam; PF05182; Fip1; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000007303}.
FT DOMAIN 144..186
FT /note="Pre-mRNA polyadenylation factor Fip1"
FT /evidence="ECO:0000259|Pfam:PF05182"
FT REGION 1..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 454..585
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..34
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..85
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 385..400
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 424..440
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 454..554
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 585 AA; 65270 MW; C0ED9F1DB4A5F16C CRC64;
MSAEEADKSA ATDASGGDEE EEWLYGDESE SKEEDEEAKL NAAVGATADP LVEDESTHTT
GNGVVSEVGE DGDSDSDSDD DDDDVRVTIG DIKTGAPQYT AYGAPPVNLN IKTTGSRPYG
QGTTKLKGID LDASGNINGV SVVEVDMESF EEKPWRKPGA DLSDYFNYGF NEDTWKAYCE
KQKRLRMGLE VSSVGSVTSK ITVRIENSVQ QLSFFFAKVQ QGRTGNEKDV SSVPVLTSKP
DFSSPVSQYK SAVTQVTSKS TSISSVYVET SMKKKSIWGR HTDKNHVCMY FFSLRKSSGT
IDVIGGQTAT ISRVEGRRRH NLDGNNIQVI AEQSDAETPA TKIPSFFPPG PLPPNIPPPP
FVPPPPSVSA APPLIPPPRL PITFPPPGFP PPPTGPPPTI IPTMDSSGHT GGYDGRSVPS
YTFPQGAYPP PMSGGVPPPW PPMMDNSKSW DYYSRREDKR DKDRERPRER THEREREREH
SPSAISYTSD EERYRYREYQ ERTYGDRHRD RSSREKEERH RERRHRDKEE GRHKSSRSSS
SRRRHDSEEG DNHRRHKHKK SKRSKEGKET SEDNNADQEN QDAME
//
