GenomeNet

Database: UniProt
Entry: H3CNZ9_TETNG
LinkDB: H3CNZ9_TETNG
Original site: H3CNZ9_TETNG 
ID   H3CNZ9_TETNG            Unreviewed;      1042 AA.
AC   H3CNZ9;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   SubName: Full=Transport and golgi organization 6 homolog (Drosophila) {ECO:0000313|Ensembl:ENSTNIP00000009982.1};
OS   Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS   nigroviridis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX   NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000009982.1, ECO:0000313|Proteomes:UP000007303};
RN   [1] {ECO:0000313|Proteomes:UP000007303}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15496914; DOI=10.1038/nature03025;
RA   Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA   Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA   Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA   Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA   Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA   Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA   Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA   McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA   Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA   Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA   Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT   "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT   early vertebrate proto-karyotype.";
RL   Nature 431:946-957(2004).
RN   [2] {ECO:0000313|Ensembl:ENSTNIP00000009982.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the Tango6 family.
CC       {ECO:0000256|ARBA:ARBA00005724}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; H3CNZ9; -.
DR   STRING; 99883.ENSTNIP00000009982; -.
DR   Ensembl; ENSTNIT00000010161.1; ENSTNIP00000009982.1; ENSTNIG00000007180.1.
DR   GeneTree; ENSGT00390000010938; -.
DR   HOGENOM; CLU_006971_1_0_1; -.
DR   InParanoid; H3CNZ9; -.
DR   OMA; TLVFTRH; -.
DR   TreeFam; TF330876; -.
DR   Proteomes; UP000007303; Unassembled WGS sequence.
DR   Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR000357; HEAT.
DR   InterPro; IPR019451; Rtp1_C1.
DR   InterPro; IPR019414; Rtp1_C2.
DR   InterPro; IPR039600; TANGO6/Rtp1.
DR   PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR   PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR   Pfam; PF02985; HEAT; 1.
DR   Pfam; PF10363; RTP1_C1; 1.
DR   Pfam; PF10304; RTP1_C2; 1.
DR   SUPFAM; SSF48371; ARM repeat; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   DOMAIN          782..897
FT                   /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10363"
FT   DOMAIN          990..1021
FT                   /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10304"
FT   REGION          593..612
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          739..775
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1042 AA;  113591 MW;  DBA608E25B8FBB04 CRC64;
     SGTSLVSPCV CDSVKMAALI LSAVELLTSP PAAASGGGAG SQEEALTAVL RANRSQLLQQ
     LEQQSALQQV RRLRQDVMAE ARWLSSSTGD VPWEFVQECL VLLLALARHL SAEVERFERS
     APSRPASQAP PLSPDVLSVT QQKTLASALQ FVVSLGLCPY LAPGVGAPLA HRSAFGASVQ
     KLCCGRVREP RRRLFTTATV LLEFAELPSL AAAVFTRHLN DLMAALCQLG YQRETVESLE
     LSAEERHTCR EALRRLLANS YQPAVIQELL LLQNGPRQQK KPGFCDLIVS AVSVLSPCRA
     EAPAWLRRLC GQLLSERLMQ PSGVHAVVRA VLGPGTEESC DWRRCEAVAR ILVTCPQQSA
     SADSYYATVC PQILELLHPS GEPAAQQCQR VAVRAVHLMA QQRPSLAQRL LLPPLFSPLQ
     RCLPAPGGCP PQAAVEEWEL SRCVDGVHKV CVLGNSRPES LLRALKGVLP VLFTLFCFTR
     QNVSHLRSSC QDILLWFLSH SQVEEALGAL QQLCGLPPSA SGPGARAGPG CVLAPRAAAE
     DGEDGVLFEK LSGEQWRLEC LAHLLAQLKD SDLPGAFLLL LLQELTDWAS CEEEENQEEE
     LTREAGVDQR GSTEQRGRRL ALLQVLAALV ECLHHTVLLR KRTQVVDFLA TLFQRACVGL
     DRAPRPGLVN MVDSEALSMG MGLLAALLSE PQLGAEDYLP MLKLLPHLET LSQAHSGASV
     RELAFSLRGV IATRGAYQPE DLGQPHRSCS SRDQQKSASR AERSPAAPQA GSPQRQLRAV
     SELLLEAFDP DVPTRAVALR ELAQMIQSRR REAVQAQEQI LRVFLKSLEH EDSFIYLSAI
     QGLAVMADGD PERILHRLLQ EFQPTSSAPP PGRASSLEVR LKTGEVLMRA SRAMGDLAPH
     LGYPLVGVFL QGTKDPDPSI RASSLSNLGE LCQRLDYSLG PLAQEVSARE MASDTVDRDL
     NINEVLSEVL LDLYRALKGR KAAGVLSEVL LDLYRALKWV VCSDPDGVSV LQAQLALEEL
     DGVMRRFIFP EQKLQKKIVV LP
//
DBGET integrated database retrieval system