ID H3CNZ9_TETNG Unreviewed; 1042 AA.
AC H3CNZ9;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE SubName: Full=Transport and golgi organization 6 homolog (Drosophila) {ECO:0000313|Ensembl:ENSTNIP00000009982.1};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000009982.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000009982.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the Tango6 family.
CC {ECO:0000256|ARBA:ARBA00005724}.
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DR AlphaFoldDB; H3CNZ9; -.
DR STRING; 99883.ENSTNIP00000009982; -.
DR Ensembl; ENSTNIT00000010161.1; ENSTNIP00000009982.1; ENSTNIG00000007180.1.
DR GeneTree; ENSGT00390000010938; -.
DR HOGENOM; CLU_006971_1_0_1; -.
DR InParanoid; H3CNZ9; -.
DR OMA; TLVFTRH; -.
DR TreeFam; TF330876; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000357; HEAT.
DR InterPro; IPR019451; Rtp1_C1.
DR InterPro; IPR019414; Rtp1_C2.
DR InterPro; IPR039600; TANGO6/Rtp1.
DR PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR Pfam; PF02985; HEAT; 1.
DR Pfam; PF10363; RTP1_C1; 1.
DR Pfam; PF10304; RTP1_C2; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 782..897
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10363"
FT DOMAIN 990..1021
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10304"
FT REGION 593..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 739..775
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1042 AA; 113591 MW; DBA608E25B8FBB04 CRC64;
SGTSLVSPCV CDSVKMAALI LSAVELLTSP PAAASGGGAG SQEEALTAVL RANRSQLLQQ
LEQQSALQQV RRLRQDVMAE ARWLSSSTGD VPWEFVQECL VLLLALARHL SAEVERFERS
APSRPASQAP PLSPDVLSVT QQKTLASALQ FVVSLGLCPY LAPGVGAPLA HRSAFGASVQ
KLCCGRVREP RRRLFTTATV LLEFAELPSL AAAVFTRHLN DLMAALCQLG YQRETVESLE
LSAEERHTCR EALRRLLANS YQPAVIQELL LLQNGPRQQK KPGFCDLIVS AVSVLSPCRA
EAPAWLRRLC GQLLSERLMQ PSGVHAVVRA VLGPGTEESC DWRRCEAVAR ILVTCPQQSA
SADSYYATVC PQILELLHPS GEPAAQQCQR VAVRAVHLMA QQRPSLAQRL LLPPLFSPLQ
RCLPAPGGCP PQAAVEEWEL SRCVDGVHKV CVLGNSRPES LLRALKGVLP VLFTLFCFTR
QNVSHLRSSC QDILLWFLSH SQVEEALGAL QQLCGLPPSA SGPGARAGPG CVLAPRAAAE
DGEDGVLFEK LSGEQWRLEC LAHLLAQLKD SDLPGAFLLL LLQELTDWAS CEEEENQEEE
LTREAGVDQR GSTEQRGRRL ALLQVLAALV ECLHHTVLLR KRTQVVDFLA TLFQRACVGL
DRAPRPGLVN MVDSEALSMG MGLLAALLSE PQLGAEDYLP MLKLLPHLET LSQAHSGASV
RELAFSLRGV IATRGAYQPE DLGQPHRSCS SRDQQKSASR AERSPAAPQA GSPQRQLRAV
SELLLEAFDP DVPTRAVALR ELAQMIQSRR REAVQAQEQI LRVFLKSLEH EDSFIYLSAI
QGLAVMADGD PERILHRLLQ EFQPTSSAPP PGRASSLEVR LKTGEVLMRA SRAMGDLAPH
LGYPLVGVFL QGTKDPDPSI RASSLSNLGE LCQRLDYSLG PLAQEVSARE MASDTVDRDL
NINEVLSEVL LDLYRALKGR KAAGVLSEVL LDLYRALKWV VCSDPDGVSV LQAQLALEEL
DGVMRRFIFP EQKLQKKIVV LP
//