ID H3CPV3_TETNG Unreviewed; 1133 AA.
AC H3CPV3;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=AT-rich interaction domain 5B {ECO:0000313|Ensembl:ENSTNIP00000010287.1};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|Ensembl:ENSTNIP00000010287.1, ECO:0000313|Proteomes:UP000007303};
RN [1] {ECO:0000313|Proteomes:UP000007303}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|Ensembl:ENSTNIP00000010287.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H3CPV3; -.
DR STRING; 99883.ENSTNIP00000010287; -.
DR Ensembl; ENSTNIT00000010468.1; ENSTNIP00000010287.1; ENSTNIG00000007478.1.
DR GeneTree; ENSGT00940000163584; -.
DR HOGENOM; CLU_007985_0_0_1; -.
DR InParanoid; H3CPV3; -.
DR OMA; YASDCYS; -.
DR TreeFam; TF324725; -.
DR Proteomes; UP000007303; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd16869; ARID_ARID5; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR PANTHER; PTHR13964:SF37; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5B; 1.
DR PANTHER; PTHR13964; RBP-RELATED; 1.
DR Pfam; PF01388; ARID; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR PROSITE; PS51011; ARID; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007303};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 318..410
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 251..318
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..467
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 507..538
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 598..621
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 635..661
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 682..718
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 731..758
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 869..906
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 930..972
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 261..290
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..431
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..463
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 598..613
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 635..649
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 692..710
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 872..891
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1133 AA; 124941 MW; 947C5F813BACA836 CRC64;
FPPQWVGSSC GLHGPYIFYK AFKFSRDGRS RILALGDFFF VRCHPEEPIC VALQLLWEER
TSKQLLSSSK LYFLPEDTPQ GRAVTHGEHE VIAVSEKVTV RLEDLVKWTV PDFSGWAHSL
KAEPLKQSVL RELGTNGRRE ALHRYRESTL TSGLNFKDVQ REKAQLGQED DGCKVLVLSY
PQYCRYRSVL ARLREQPSAL LIDHTVLALG GIAALGGNTR ILYCRDTFDH PALLKNESVC
DEFAPNLKGR PRKKKLSISQ RRESQGSTAG AASDPCTPES KTTTKVKCKT LPNGKITPAS
KHKAGGISRK SSTSEESRAE EQAFLVDLYK YMKDRDTPIE RIPFLGFKQI NLWTMFQAAQ
KLGGYELITV RRQWKHVYDE LGGNPSSTSA ATCTRRHYER LLLPYERHLK GEQDKPLPLP
KPRKQDGVQD KAPSAKVKAV GAKKLKNASK SEMKNDRGEA AKEQEPSQVS GASCHASLCL
VPECPCSTRV CVYEPALTVP FLRAGLQRDG GEDGRRRQTG HAPARRAHPN RGRGVAPDLE
EGGVLCARAA VAALPQRADR PDWRQISEVL QAKLSSEQHT EGHFIPKNLY LPHRWEQNKT
SGQEPSSRAK DSTQGHGGRV GKVLPMCKQE ECIDLSSDSF PEKEDSGVAK ESIQSSAYSK
AGQVVMSPLA KKKLLSQPPL PAAAPSLAVL PPDRRENEKR KAEEEVAGQR RGCVSDSVPE
AAPVFRPSVI QHAQSSRPQQ GPARAPAEKG HPGELPEGYV CRTGHGVRPQ LNPPWQPYLP
RAHAQETADK GGEALLEDPG APARTYAGDC YSSPHLHSLY RQTESCLGQE RMVGFLNGER
REPYGRDREG QAFVCGGLEQ EGLAYRSHFS ERTQTQAERR EAEDEPRDYT VPKPLSQRVS
SFSKPSFCSP PYPILSQGLE SRPKACRVPP LTVSPPKASP SEALQPFPCS PKASGDASLS
SPARAAKRPL VEVDGEEVPE RKVRVVTPIP GRRVRRSDPE ELKPAEPAHA VHLNNHLPEG
HPASTYPPHH AAPYYTGIYP PCSLVSPGAQ DGLQQHPGLQ YLKSQSAVSP LVPPLALHSM
MLHRQLLASH PSPHHFYGHP GGAALYGDLL HHLYPLSPLP PPQLSSVHPS TRL
//
