ID H3H1R4_PHYRM Unreviewed; 716 AA.
AC H3H1R4;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE RecName: Full=THO complex subunit 5 {ECO:0008006|Google:ProtNLM};
OS Phytophthora ramorum (Sudden oak death agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=164328 {ECO:0000313|EnsemblProtists:Phyra84211, ECO:0000313|Proteomes:UP000005238};
RN [1] {ECO:0000313|Proteomes:UP000005238}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pr102 {ECO:0000313|Proteomes:UP000005238};
RX PubMed=16946064; DOI=10.1126/science.1128796;
RA Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H., Aerts A.,
RA Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J.,
RA Damasceno C.M., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L.,
RA Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., Huang W.,
RA Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., Lee M.K.,
RA McDonald W.H., Medina M., Meijer H.J., Nordberg E.K., Maclean D.J.,
RA Ospina-Giraldo M.D., Morris P.F., Phuntumart V., Putnam N.H., Rash S.,
RA Rose J.K., Sakihama Y., Salamov A.A., Savidor A., Scheuring C.F.,
RA Smith B.M., Sobral B.W., Terry A., Torto-Alalibo T.A., Win J., Xu Z.,
RA Zhang H., Grigoriev I.V., Rokhsar D.S., Boore J.L.;
RT "Phytophthora genome sequences uncover evolutionary origins and mechanisms
RT of pathogenesis.";
RL Science 313:1261-1266(2006).
RN [2] {ECO:0000313|EnsemblProtists:Phyra84211}
RP IDENTIFICATION.
RC STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra84211};
RG EnsemblProtists;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the THOC5 family.
CC {ECO:0000256|ARBA:ARBA00008044}.
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DR EMBL; DS566103; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3H1R4; -.
DR STRING; 164328.H3H1R4; -.
DR EnsemblProtists; Phyra84211; Phyra84211; Phyra84211.
DR eggNOG; KOG2216; Eukaryota.
DR HOGENOM; CLU_025420_0_0_1; -.
DR InParanoid; H3H1R4; -.
DR OMA; WNGCHTS; -.
DR Proteomes; UP000005238; Unassembled WGS sequence.
DR GO; GO:0000445; C:THO complex part of transcription export complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0032786; P:positive regulation of DNA-templated transcription, elongation; IBA:GO_Central.
DR InterPro; IPR019163; THO_Thoc5.
DR PANTHER; PTHR13375; FMS INTERACTING PROTEIN; 1.
DR PANTHER; PTHR13375:SF3; THO COMPLEX SUBUNIT 5 HOMOLOG; 1.
DR Pfam; PF09766; FmiP_Thoc5; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000005238}.
FT REGION 236..337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 468..490
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 627..654
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 254..268
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 298..334
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..487
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 716 AA; 80046 MW; 64849E186D13699B CRC64;
MAGLYAHRTS DEARLKQRRW RVLLLLGAMK SGLRETFLES DGRRARVQEQ KDVAEAHQLQ
LQNLLYEKDH LLREIGRCRG FSTKEMDKIE FADGDVPITV DADVHRQHLD QLTQELHARK
RLQTQLKEIK LKIAKVEDAT ETKQAFLNAL PDHLAGIEAA TTGLQKYMGE PVSAQRARHQ
TAGVELATPL YALYCELEAY RTASGEAGKQ LALDIVDAVG VKHVGAFRKR GFPAALDRQE
SSTAAVKRLK APSRSPSASV NGATPLGRPP SRSPSAKRGA DSTTREPESG EIVATHTAEK
LLELRPHASP SEEEETKEEG LESKHSHHHD QDEGAASAQN LWKPHTKALQ LTVSIQTPLD
ADKSGAAATS VSGTFTLMFQ YFPVAKVVTA EVVKTNPASL NHGSHQRSIL TNLFPGDDGL
TVPHLAVNYA YHEEDEERTE VEFPANAVCR PYYWAQWICG LDPMKRPDSS DMAIDTTEEK
PRRRPEPSVR NVMSQLVKRF VATAVLKKHL DQLNKSTGAS HRSQDDGAHF VHPLARHLYP
HVVKTHLEEW KEIPAPPQDV FQLFRESVAP STRPRAQFHL PTTGCRYFRS GFKNGQTKVS
AIVEISPEYP VRAPRFLFQP RSSSSSKAVD KDQLPVYENQ LKELEIEVNA YYDELIPKGS
EHFLLLHQLR KIEVCFDVLC NAAANSDADV SLCFGRERRG KDRRQAMVMD TAAKEL
//