ID   H3HA31_PHYRM            Unreviewed;       497 AA.
AC   H3HA31;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   RecName: Full=Retrotransposon gag domain-containing protein {ECO:0000259|Pfam:PF03732};
OS   Phytophthora ramorum (Sudden oak death agent).
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=164328 {ECO:0000313|EnsemblProtists:Phyra87743, ECO:0000313|Proteomes:UP000005238};
RN   [1] {ECO:0000313|Proteomes:UP000005238}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pr102 {ECO:0000313|Proteomes:UP000005238};
RX   PubMed=16946064; DOI=10.1126/science.1128796;
RA   Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H., Aerts A.,
RA   Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J.,
RA   Damasceno C.M., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L.,
RA   Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., Huang W.,
RA   Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., Lee M.K.,
RA   McDonald W.H., Medina M., Meijer H.J., Nordberg E.K., Maclean D.J.,
RA   Ospina-Giraldo M.D., Morris P.F., Phuntumart V., Putnam N.H., Rash S.,
RA   Rose J.K., Sakihama Y., Salamov A.A., Savidor A., Scheuring C.F.,
RA   Smith B.M., Sobral B.W., Terry A., Torto-Alalibo T.A., Win J., Xu Z.,
RA   Zhang H., Grigoriev I.V., Rokhsar D.S., Boore J.L.;
RT   "Phytophthora genome sequences uncover evolutionary origins and mechanisms
RT   of pathogenesis.";
RL   Science 313:1261-1266(2006).
RN   [2] {ECO:0000313|EnsemblProtists:Phyra87743}
RP   IDENTIFICATION.
RC   STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra87743};
RG   EnsemblProtists;
RL   Submitted (JUN-2015) to UniProtKB.
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DR   EMBL; DS568305; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; H3HA31; -.
DR   EnsemblProtists; Phyra87743; Phyra87743; Phyra87743.
DR   VEuPathDB; FungiDB:PSURA_87743; -.
DR   eggNOG; KOG0017; Eukaryota.
DR   HOGENOM; CLU_000384_41_1_1; -.
DR   InParanoid; H3HA31; -.
DR   Proteomes; UP000005238; Unassembled WGS sequence.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR032567; LDOC1-rel.
DR   InterPro; IPR005162; Retrotrans_gag_dom.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   PANTHER; PTHR15503:SF39; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR   Pfam; PF03732; Retrotrans_gag; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000005238}.
FT   DOMAIN          97..191
FT                   /note="Retrotransposon gag"
FT                   /evidence="ECO:0000259|Pfam:PF03732"
SQ   SEQUENCE   497 AA;  55628 MW;  C2C62C773153280A CRC64;
     MDRSEFPHLN DSQFESVRKM AGIFGMDALQ SLAAATPAEQ LERAPVAERK PVQPKPLRLK
     VNPYEGKEGE NLHFWVREVE LATDAALVSD ERLRVAFALS HLSGRAKSWA YTREATTPGC
     FASWAQLCEQ LRAAFLPANY EYRQRSRFLA CKQGRRELHE YIQEMRELTA SLVGNPLHEH
     IKVTVFMDGL RVGPARTQLF RVQASTLEEA IQIALQEEYS HRQARTPATA WLGGSTQGGP
     QSRGPFNGPV PMDLSLAEQH DIRCFGCGKL GHMKPLPEVS ELLNLEEMSM DDFLAQLKAE
     AIAEMVLLKP EASPEELSSS SVMDKDVLDE LGKKRATRTG SAILENPKDP VYPLVKEFSD
     VVSKDPPSQL PPDRGVRHEI DLVPGTKYCV TRQWPLPREQ CKVIDAFFAA KAKAGMVRES
     KSPHSTPTFC VRKPNGKWRL VHAYNKLNSA TVPAQTPIPR KDVLLNNMAG CELYSALDLV
     DGYYQILMRE RDIPLTA
//