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Database: UniProt
Entry: H3ZM15_THELN
LinkDB: H3ZM15_THELN
Original site: H3ZM15_THELN 
ID   H3ZM15_THELN            Unreviewed;       442 AA.
AC   H3ZM15;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 55.
DE   SubName: Full=Nol1-nop2-sun family nucleolar protein IV {ECO:0000313|EMBL:EHR78959.1};
GN   ORFNames=OCC_06721 {ECO:0000313|EMBL:EHR78959.1};
OS   Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Thermococcus.
OX   NCBI_TaxID=523849 {ECO:0000313|EMBL:EHR78959.1, ECO:0000313|Proteomes:UP000015502};
RN   [1] {ECO:0000313|EMBL:EHR78959.1, ECO:0000313|Proteomes:UP000015502}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 51850 / DSM 5473 / JCM 8560 / NS-C
RC   {ECO:0000313|Proteomes:UP000015502};
RX   PubMed=22493191; DOI=10.1128/JB.00123-12;
RA   Gardner A.F., Kumar S., Perler F.B.;
RT   "Genome sequence of the model hyperthermophilic archaeon Thermococcus
RT   litoralis NS-C.";
RL   J. Bacteriol. 194:2375-2376(2012).
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RsmB/NOP family. {ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR   EMBL; CP006670; EHR78959.1; -; Genomic_DNA.
DR   RefSeq; WP_004067647.1; NC_022084.1.
DR   AlphaFoldDB; H3ZM15; -.
DR   STRING; 523849.OCC_06721; -.
DR   PaxDb; 523849-OCC_06721; -.
DR   GeneID; 16549276; -.
DR   KEGG; tlt:OCC_06721; -.
DR   HOGENOM; CLU_005316_0_1_2; -.
DR   OMA; NPELRWR; -.
DR   OrthoDB; 14725at2157; -.
DR   Proteomes; UP000015502; Chromosome.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR   GO; GO:0001510; P:RNA methylation; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd02440; AdoMet_MTases; 1.
DR   Gene3D; 1.10.287.730; Helix hairpin bin; 1.
DR   Gene3D; 1.10.940.10; NusB-like; 1.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR031341; Methyltr_RsmF_N.
DR   InterPro; IPR001678; MeTrfase_RsmB/NOP2.
DR   InterPro; IPR011023; Nop2p.
DR   InterPro; IPR035926; NusB-like_sf.
DR   InterPro; IPR023267; RCMT.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   NCBIfam; TIGR00446; nop2p; 1.
DR   PANTHER; PTHR22807; NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR   PANTHER; PTHR22807:SF74; TRNA (CYTOSINE(48)-C(5))-METHYLTRANSFERASE; 1.
DR   Pfam; PF01189; Methyltr_RsmB-F; 1.
DR   Pfam; PF17125; Methyltr_RsmF_N; 1.
DR   PRINTS; PR02008; RCMTFAMILY.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01023};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU01023};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01023};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01023}.
FT   DOMAIN          170..440
FT                   /note="SAM-dependent MTase RsmB/NOP-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51686"
FT   ACT_SITE        381
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         258..264
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         282
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         309
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         328
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ   SEQUENCE   442 AA;  50699 MW;  EABADA79411EDD9A CRC64;
     MGKLKLSDRQ LYALVEALKL GEEVKPSQQA KRKAFAKYKI EGWENSKLTG IFYSIQRRLG
     LIDEIIEELV GVSPLILDPW LRATLRVAIE IAVFRNPNEK TIQHLKGLAK FLSKRTHPYV
     GYYYYELFPK VINYIPKLDT EEKRLKWEYL FPEWFIARMK ALLGEEAEEL LKALNETLPT
     SIRANLIKTS VGDVENHLRK KGVRFERSNR VETVIRILDP FNPEWLFNKG YAIAQEEASA
     VASLILSPKP GETVVDLAAA PGGKTSHMAE LMENKGKIYA FDVDKTRIKR MKEVLRRTGV
     EIAEVIKADG RKAPELLGEE IADKVMLDAP CTSDGTIAKN PELRWRLREK NIPKVVTLQK
     ELIESAWKLL KPGGRLLYST CSMLPEENEE VIKWFLERHS DAKLIPLNGP YDPGFLEGTM
     RAWPHRHKTI GFFYALIEKK RS
//
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