ID H5TA12_9ALTE Unreviewed; 333 AA.
AC H5TA12;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:GAB55139.1};
GN ORFNames=GPUN_1008 {ECO:0000313|EMBL:GAB55139.1};
OS Glaciecola punicea ACAM 611.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Glaciecola.
OX NCBI_TaxID=1121923 {ECO:0000313|EMBL:GAB55139.1, ECO:0000313|Proteomes:UP000053586};
RN [1] {ECO:0000313|EMBL:GAB55139.1, ECO:0000313|Proteomes:UP000053586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACAM 611 {ECO:0000313|EMBL:GAB55139.1,
RC ECO:0000313|Proteomes:UP000053586};
RX PubMed=22628500; DOI=10.1128/JB.00463-12;
RA Qin Q.-L., Xie B.-B., Shu Y.-L., Rong J.-C., Zhao D.-L., Zhang X.-Y.,
RA Chen X.-L., Zhou B.-C., Zhanga Y.-Z.;
RT "Genome sequence of proteorhodopsin-containing sea ice bacterium Glaciecola
RT punicea ACAM 611T.";
RL J. Bacteriol. 194:3267-3267(2012).
RN [2] {ECO:0000313|EMBL:GAB55139.1, ECO:0000313|Proteomes:UP000053586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACAM 611 {ECO:0000313|EMBL:GAB55139.1,
RC ECO:0000313|Proteomes:UP000053586};
RX PubMed=25009843;
RA Qin Q.-L., Xie B.-B., Yu Y., Shu Y.-L., Rong J.-C., Zhang Y.-J.,
RA Zhao D.-L., Chen X.-L., Zhang X.-Y., Chen B., Zhou B.-C., Zhang Y.-Z.;
RT "Comparative genomics of the marine bacterial genus Glaciecola reveals the
RT high degree of genomic diversity and genomic characteristic for cold
RT adaptation.";
RL Environ. Microbiol. 16:1642-1653(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAB55139.1}.
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DR EMBL; BAET01000008; GAB55139.1; -; Genomic_DNA.
DR RefSeq; WP_006003976.1; NZ_BAET01000008.1.
DR AlphaFoldDB; H5TA12; -.
DR STRING; 56804.BAE46_01615; -.
DR eggNOG; COG4977; Bacteria.
DR OrthoDB; 5582699at2; -.
DR Proteomes; UP000053586; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd03138; GATase1_AraC_2; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF11; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000053586}.
FT DOMAIN 228..326
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 333 AA; 37014 MW; 6AEA41A83155B5E8 CRC64;
MPYFKPLQVV IVGFDGVLGS ALAGALDLFS FTGVSWQRFV NEPVEPRFNV QIASLYKQNF
TCSNRLSISA HCDLANVKHC DLLLIPTIGD SIEKVLSNTQ ALLPHIIRLS KQGVDIASNC
SGAFLLAKAG LLNNKEATTH WGYAEKFKQD FPLVLLTPSK LVTQHDNIFC AAGGSAFYDL
GLLLIERYCG RDIAGQVAKT QVIDSRRRNQ SLYANVNLYK SHSDALVRQV QDYIEDNFCD
PISVSGLCSD FNLIPRTLNR RFQASVSMRP LAYIQAVRIE QAKRLLEIGE TNIKSLSSAV
GYDDNSSFTR LFKRLTSLTP KEYKDKVYKA SAS
//
