ID H5X5K3_9PSEU Unreviewed; 344 AA.
AC H5X5K3;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=DNA polymerase sliding clamp subunit {ECO:0000313|EMBL:EHR50075.1};
GN ORFNames=SacmaDRAFT_1806 {ECO:0000313|EMBL:EHR50075.1};
OS Saccharomonospora marina XMU15.
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Saccharomonospora.
OX NCBI_TaxID=882083 {ECO:0000313|EMBL:EHR50075.1, ECO:0000313|Proteomes:UP000004926};
RN [1] {ECO:0000313|EMBL:EHR50075.1, ECO:0000313|Proteomes:UP000004926}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=XMU15 {ECO:0000313|EMBL:EHR50075.1,
RC ECO:0000313|Proteomes:UP000004926};
RX PubMed=22768369; DOI=10.4056/sigs.2655905;
RA Klenk H.P., Lu M., Lucas S., Lapidus A., Copeland A., Pitluck S.,
RA Goodwin L.A., Han C., Tapia R., Brambilla E.M., Potter G., Land M.,
RA Ivanova N., Rohde M., Goker M., Detter J.C., Li W.J., Kyrpides N.C.,
RA Woyke T.;
RT "Genome sequence of the ocean sediment bacterium Saccharomonospora marina
RT type strain (XMU15(T)).";
RL Stand. Genomic Sci. 6:265-275(2012).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the beta sliding clamp family.
CC {ECO:0000256|ARBA:ARBA00010752}.
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DR EMBL; CM001439; EHR50075.1; -; Genomic_DNA.
DR RefSeq; WP_009153460.1; NZ_CM001439.1.
DR AlphaFoldDB; H5X5K3; -.
DR STRING; 882083.SacmaDRAFT_1806; -.
DR eggNOG; COG0592; Bacteria.
DR eggNOG; COG0789; Bacteria.
DR HOGENOM; CLU_066011_0_0_11; -.
DR OrthoDB; 7849865at2; -.
DR Proteomes; UP000004926; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01107; HTH_BmrR; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 3.10.150.10; DNA Polymerase III, subunit A, domain 2; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR046938; DNA_clamp_sf.
DR InterPro; IPR001001; DNA_polIII_beta.
DR InterPro; IPR022637; DNA_polIII_beta_cen.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR PANTHER; PTHR30478:SF0; BETA SLIDING CLAMP; 1.
DR PANTHER; PTHR30478; DNA POLYMERASE III SUBUNIT BETA; 1.
DR Pfam; PF02767; DNA_pol3_beta_2; 1.
DR Pfam; PF13411; MerR_1; 1.
DR SMART; SM00422; HTH_MERR; 1.
DR SMART; SM00480; POL3Bc; 1.
DR SUPFAM; SSF55979; DNA clamp; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS00552; HTH_MERR_1; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000004926};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..71
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
SQ SEQUENCE 344 AA; 36760 MW; 6300785BB84F3722 CRC64;
MHNIGAFARS VGLTPSALRF YDDCGLLPPA HVDPVTGYRY YEPTQQDRAV LVRKLRAAGL
RLADVAAVLD GPGDVAREVL RGHARRLREE SEAARAALQE VVSSYLSEGR TQVTVDGAEL
AGAVRQVAPS AARDPEPAPL RCVLFEVTDT EVRLVATDRY RLAVRELACG WVEGPPARVL
VPVPALLEAA AWAARESEVQ LAVEEGNLEL CAQGSRYPLP AGTGEFPAYR EMLAALAAPK
QRVLVDRRAL REALDKADAP AVLRRGDGGS TDDELVIGTT ALPAVCPEGL RIAFDPMVLG
PAVEASVGPD VLLEIDAADR PVLVRSADQG SFSTLVMPVA DPRR
//
