ID H6L9U3_SAPGL Unreviewed; 399 AA.
AC H6L9U3;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=THUMP domain-containing protein {ECO:0000313|EMBL:AFC24306.1};
DE EC=2.1.1.- {ECO:0000313|EMBL:AFC24306.1};
GN Name=ypsC {ECO:0000313|EMBL:AFC24306.1};
GN OrderedLocusNames=SGRA_1571 {ECO:0000313|EMBL:AFC24306.1};
OS Saprospira grandis (strain Lewin).
OC Bacteria; Bacteroidota; Saprospiria; Saprospirales; Saprospiraceae;
OC Saprospira.
OX NCBI_TaxID=984262 {ECO:0000313|EMBL:AFC24306.1, ECO:0000313|Proteomes:UP000007519};
RN [1] {ECO:0000313|EMBL:AFC24306.1, ECO:0000313|Proteomes:UP000007519}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Lewin {ECO:0000313|EMBL:AFC24306.1,
RC ECO:0000313|Proteomes:UP000007519};
RX PubMed=22675601; DOI=10.4056/sigs.2445005;
RA Saw J.H., Yuryev A., Kanbe M., Hou S., Young A.G., Aizawa S., Alam M.;
RT "Complete genome sequencing and analysis of Saprospira grandis str. Lewin,
RT a predatory marine bacterium.";
RL Stand. Genomic Sci. 6:84-93(2012).
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DR EMBL; CP002831; AFC24306.1; -; Genomic_DNA.
DR RefSeq; WP_015691942.1; NC_016940.1.
DR AlphaFoldDB; H6L9U3; -.
DR STRING; 984262.SGRA_1571; -.
DR KEGG; sgn:SGRA_1571; -.
DR eggNOG; COG0116; Bacteria.
DR HOGENOM; CLU_032119_3_0_10; -.
DR OrthoDB; 9809404at2; -.
DR Proteomes; UP000007519; Chromosome.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0034470; P:ncRNA processing; IEA:UniProt.
DR GO; GO:0009451; P:RNA modification; IEA:UniProt.
DR CDD; cd11715; THUMP_AdoMetMT; 1.
DR Gene3D; 3.30.2130.30; -; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR000241; RlmKL-like_Mtase.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR004114; THUMP_dom.
DR PANTHER; PTHR47313; RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/L; 1.
DR PANTHER; PTHR47313:SF1; RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K_L; 1.
DR Pfam; PF02926; THUMP; 1.
DR Pfam; PF01170; UPF0020; 1.
DR SMART; SM00981; THUMP; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS51165; THUMP; 1.
PE 4: Predicted;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603,
KW ECO:0000313|EMBL:AFC24306.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007519};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00529};
KW Transferase {ECO:0000313|EMBL:AFC24306.1}.
FT DOMAIN 43..155
FT /note="THUMP"
FT /evidence="ECO:0000259|PROSITE:PS51165"
SQ SEQUENCE 399 AA; 45280 MW; 2B31DB2C293DE90C CRC64;
MQAYIATTFF GLENVLAKEL SQLGAKNIKP LKRAVRFEAD PLQLYKANMG LRTALHILHP
LAEEKVRNAD QLYALGKAIN WMRWFNNEAT YAIRARVSQA PEFKSPLFAA LKLKDAIADQ
FRDFTGSRPN IDRDNPDIEI HLHIFRDRCS ISIDSSGSSL HRRGYRRGGH AAPMNEVLAA
GMLLLSDWRG QGNLVDFMCG SGTILTEGAL LATNKAPNLL RPNFSLKHWK NFDKELWSQA
RMELMSEEKS FEHRIYGSDF KRSAISEAFK NAHSAGVADL MQLENLDFRK LKRPEEGEPG
AVIINPPYGE RLKPSQIGRL YAQIGDALKQ HFSGYSAWIL SSNREATKEV GLRPKNRIPL
YNGPLECRLL QYDLYDGSKY LEKKRQAEKE NDAPKKEES
//
