GenomeNet

Database: UniProt
Entry: HOX21_ORYSI
LinkDB: HOX21_ORYSI
Original site: HOX21_ORYSI 
ID   HOX21_ORYSI             Reviewed;         360 AA.
AC   A2XD08; A5JPV9;
DT   29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT   29-APR-2008, sequence version 2.
DT   31-JUL-2019, entry version 74.
DE   RecName: Full=Homeobox-leucine zipper protein HOX21;
DE   AltName: Full=HD-ZIP protein HOX21;
DE   AltName: Full=Homeodomain transcription factor HOX21;
DE   AltName: Full=OsHox21;
GN   Name=HOX21; ORFNames=OsI_009951;
OS   Oryza sativa subsp. indica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39946;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 93-11;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H.,
RA   Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J.,
RA   Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X.,
RA   Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y.,
RA   Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J.,
RA   Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y.,
RA   Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y.,
RA   Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z.,
RA   Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T.,
RA   Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 146-253, TISSUE SPECIFICITY, GENE
RP   FAMILY, AND NOMENCLATURE.
RC   STRAIN=cv. Minghui 86;
RX   PubMed=17999151; DOI=10.1007/s11103-007-9255-7;
RA   Agalou A., Purwantomo S., Oevernaes E., Johannesson H., Zhu X.,
RA   Estiati A., de Kam R.J., Engstroem P., Slamet-Loedin I.H., Zhu Z.,
RA   Wang M., Xiong L., Meijer A.H., Ouwerkerk P.B.F.;
RT   "A genome-wide survey of HD-Zip genes in rice and analysis of drought-
RT   responsive family members.";
RL   Plant Mol. Biol. 66:87-103(2008).
CC   -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in seedlings, roots, stems, leaf
CC       blades and panicles. {ECO:0000269|PubMed:17999151}.
CC   -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class I
CC       subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=EAY88718.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
DR   EMBL; CM000128; EAY88718.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; EF555544; ABQ57285.1; -; mRNA.
DR   SMR; A2XD08; -.
DR   Proteomes; UP000007015; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome; DNA-binding; Homeobox; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN         1    360       Homeobox-leucine zipper protein HOX21.
FT                                /FTId=PRO_0000331714.
FT   DNA_BIND    121    180       Homeobox. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00108}.
FT   REGION      179    223       Leucine-zipper.
FT   COMPBIAS     31     72       His-rich.
FT   COMPBIAS     57     71       Pro-rich.
FT   COMPBIAS     97    103       Poly-Gly.
FT   COMPBIAS    268    272       Poly-His.
FT   COMPBIAS    273    325       Gly-rich.
SQ   SEQUENCE   360 AA;  38878 MW;  E11F2AF4F887495F CRC64;
     MASNGMASSP SSFFPPNFLL HMAQQQAAPP HDPQEHHHHH HHGHHHEQQQ HHHHLGPPPP
     PPPHPHNPFL PSSAQCPSLQ EFRGMAPMLG KRPMSYGDGG GGGDEVNGGG EDELSDDGSQ
     AGEKKRRLNV EQVRTLEKNF ELGNKLEPER KMQLARALGL QPRQVAIWFQ NRRARWKTKQ
     LEKDYDALKR QLDAVKAEND ALLNHNKKLQ AEIVALKGRE AASELINLNK ETEASCSNRS
     ENSSEINLDI SRTPPPDAAA LDAAPTAHHH HHGGGGGGGG GGGMIPFYTS IARPASGGGV
     DIDQLLHSSS GGAGGPKMEH HGGGGNVQAA SVDTASFGNL LCGVDEPPPF WPWPDHQHFH
//
DBGET integrated database retrieval system