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Database: UniProt
Entry: HOX7_ORYSJ
LinkDB: HOX7_ORYSJ
Original site: HOX7_ORYSJ 
ID   HOX7_ORYSJ              Reviewed;         349 AA.
AC   Q0E0A6; A0A0P0VKI4; Q6Z7D8;
DT   29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT   17-OCT-2006, sequence version 1.
DT   16-OCT-2019, entry version 94.
DE   RecName: Full=Homeobox-leucine zipper protein HOX7;
DE   AltName: Full=HD-ZIP protein HOX7;
DE   AltName: Full=Homeodomain transcription factor HOX7;
DE   AltName: Full=OsHox7;
GN   Name=HOX7; OrderedLocusNames=Os02g0565600, LOC_Os02g35770;
GN   ORFNames=P0020C11.33;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA   McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA   Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA   Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA   Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using
RT   next generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [5]
RP   FUNCTION, SUBUNIT, AND TISSUE SPECIFICITY.
RX   PubMed=10732669; DOI=10.1007/pl00008671;
RA   Meijer A.H., de Kam R.J., d'Erfurth I., Shen W.-B., Hoge J.H.C.;
RT   "HD-Zip proteins of families I and II from rice: interactions and
RT   functional properties.";
RL   Mol. Gen. Genet. 263:12-21(2000).
RN   [6]
RP   TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=17999151; DOI=10.1007/s11103-007-9255-7;
RA   Agalou A., Purwantomo S., Oevernaes E., Johannesson H., Zhu X.,
RA   Estiati A., de Kam R.J., Engstroem P., Slamet-Loedin I.H., Zhu Z.,
RA   Wang M., Xiong L., Meijer A.H., Ouwerkerk P.B.F.;
RT   "A genome-wide survey of HD-Zip genes in rice and analysis of drought-
RT   responsive family members.";
RL   Plant Mol. Biol. 66:87-103(2008).
CC   -!- FUNCTION: Probable transcription factor that binds to the DNA
CC       sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}.
CC   -!- SUBUNIT: Homodimer (Probable). May form a heterodimer with HOX1,
CC       HOX2 or HOX3. {ECO:0000269|PubMed:10732669, ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves, nodes,
CC       internodes, flowers and embryo. {ECO:0000269|PubMed:10732669,
CC       ECO:0000269|PubMed:17999151}.
CC   -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class II
CC       subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AK064118; Type=Frameshift; Evidence={ECO:0000305};
CC       Sequence=BAD15830.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
DR   EMBL; AP004865; BAD15830.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008208; BAF09082.1; -; Genomic_DNA.
DR   EMBL; AP014958; BAS79301.1; -; Genomic_DNA.
DR   EMBL; AK064118; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015626174.1; XM_015770688.1.
DR   SMR; Q0E0A6; -.
DR   STRING; 4530.OS02T0565600-01; -.
DR   PaxDb; Q0E0A6; -.
DR   PRIDE; Q0E0A6; -.
DR   EnsemblPlants; Os02t0565600-01; Os02t0565600-01; Os02g0565600.
DR   GeneID; 4329705; -.
DR   Gramene; Os02t0565600-01; Os02t0565600-01; Os02g0565600.
DR   KEGG; osa:4329705; -.
DR   eggNOG; KOG0483; Eukaryota.
DR   eggNOG; ENOG410Z2UE; LUCA.
DR   InParanoid; Q0E0A6; -.
DR   OMA; EQDNQKT; -.
DR   OrthoDB; 1014909at2759; -.
DR   Proteomes; UP000059680; Chromosome 2.
DR   Genevisible; Q0E0A6; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   1: Evidence at protein level;
KW   Complete proteome; DNA-binding; Homeobox; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN         1    349       Homeobox-leucine zipper protein HOX7.
FT                                /FTId=PRO_0000331687.
FT   DNA_BIND    150    209       Homeobox. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00108}.
FT   REGION      208    252       Leucine-zipper.
SQ   SEQUENCE   349 AA;  37438 MW;  8A8B5C38E685BCD3 CRC64;
     MELELSLGDS PAPVKATIAP TPVLIPTCMG DEEDLELVLG VRATRRDEQD DQTTCTQSSE
     EAMEGEEDET RPHGEAPVES LSFPLFVSSA ETGSANSEMC TRGFDVNTRP ADGGAEAGRP
     SSPSSMQEAS TRQQVADQEA ADDEDNGGGG ARKKLRLSKE QSSFLEDSFK EHSTLTPKQK
     SDLANRLNLR PRQVEVWFQN RRARTKLKQT EVDCEHLKRC CERLTRENRR LQREVAELRG
     TLRTTTSSYP PLYGLHHLPA AAGTVFRVCP SCEHSKVVAA AASESFSPRV FAGGGAPAAI
     TAAAAVPSPG AGSPPSSSAA LFGARRPHFG PFAAAVIPPV LRRQPSATS
//
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