ID I0ANZ4_IGNAJ Unreviewed; 487 AA.
AC I0ANZ4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:AFH50701.1};
GN Name=rpoN {ECO:0000313|EMBL:AFH50701.1};
GN OrderedLocusNames=IALB_2998 {ECO:0000313|EMBL:AFH50701.1};
OS Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /
OS Mat9-16).
OC Bacteria; Ignavibacteriota; Ignavibacteria; Ignavibacteriales;
OC Ignavibacteriaceae; Ignavibacterium.
OX NCBI_TaxID=945713 {ECO:0000313|EMBL:AFH50701.1, ECO:0000313|Proteomes:UP000007394};
RN [1] {ECO:0000313|EMBL:AFH50701.1, ECO:0000313|Proteomes:UP000007394}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16
RC {ECO:0000313|Proteomes:UP000007394};
RX PubMed=22661972; DOI=10.3389/fmicb.2012.00185;
RA Liu Z., Frigaard N.-U., Vogl K., Iino T., Ohkuma M., Overmann J.,
RA Bryant D.A.;
RT "Complete genome of Ignavibacterium album, a metabolically versatile,
RT flagellated, facultative anaerobe from the phylum Chlorobi.";
RL Front. Microbiol. 3:185-185(2012).
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; CP003418; AFH50701.1; -; Genomic_DNA.
DR RefSeq; WP_014561839.1; NC_017464.1.
DR AlphaFoldDB; I0ANZ4; -.
DR STRING; 945713.IALB_2998; -.
DR GeneID; 78244533; -.
DR KEGG; ial:IALB_2998; -.
DR PATRIC; fig|945713.3.peg.3017; -.
DR eggNOG; COG1508; Bacteria.
DR HOGENOM; CLU_020569_0_1_10; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000007394; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:AFH50701.1};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000007394};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 110..306
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 327..484
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
FT REGION 52..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 52..91
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 487 AA; 57581 MW; 6C39622E87826575 CRC64;
MLTLNQRLSQ QQRLSPQQIQ YQKLLQLNNL ALEQRIKTEL EMNPLLVEEM ELETEQDDKE
KETETETESE VDTTEDSDKA DEEFSLEDFM NDDELDHEKL NRSNDEEVFH PIAPQKTSLY
EHLREQLMML DLDENLYMLG EEIIGNLDAD GYLKRDLAEI VQELELFEHV KIDMKDAEEL
LKKIQKFDPI GIASRSLQEC LIVQLQEAKA DEYYKYIAIK ILEDYYDEFS KRRFDIIKKK
MKLTDDTLKE ALDLIQKMNP KPGEGNVDIV EMNQVTPDFI VEKVNDMWIV TLNDKSMPSI
TIDKKYLEMF DANKRKKRSD RERETYKFLR EKFESAKWFI ACIQQRRDTL MKIMRAILEM
QYEFFEKGPK YLKPMIYKDI ADIIGMDIST ISRVVNGKYV QSPQGIHELK YFFSEGLSTD
TGEEVSNKHI RERVKEIIES ENKKAPYSDE KIAQMLQAEG IHVARRTIAK YREMLKIPVA
RLRKENI
//
