ID I0HWH9_RUBGI Unreviewed; 663 AA.
AC I0HWH9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Transcriptional regulator, TyrR family {ECO:0000313|EMBL:BAL97366.1};
GN OrderedLocusNames=RGE_40300 {ECO:0000313|EMBL:BAL97366.1};
OS Rubrivivax gelatinosus (strain NBRC 100245 / IL144).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Sphaerotilaceae; Rubrivivax.
OX NCBI_TaxID=983917 {ECO:0000313|EMBL:BAL97366.1, ECO:0000313|Proteomes:UP000007883};
RN [1] {ECO:0000313|EMBL:BAL97366.1, ECO:0000313|Proteomes:UP000007883}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 100245 / IL144 {ECO:0000313|Proteomes:UP000007883};
RX PubMed=22689232; DOI=10.1128/JB.00511-12;
RA Nagashima S., Kamimura A., Shimizu T., Nakamura-isaki S., Aono E.,
RA Sakamoto K., Ichikawa N., Nakazawa H., Sekine M., Yamazaki S., Fujita N.,
RA Shimada K., Hanada S., Nagashima K.V.P.;
RT "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax
RT gelatinosus IL144.";
RL J. Bacteriol. 194:3541-3542(2012).
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DR EMBL; AP012320; BAL97366.1; -; Genomic_DNA.
DR RefSeq; WP_014430216.1; NC_017075.1.
DR AlphaFoldDB; I0HWH9; -.
DR STRING; 983917.RGE_40300; -.
DR KEGG; rge:RGE_40300; -.
DR PATRIC; fig|983917.3.peg.3929; -.
DR eggNOG; COG3284; Bacteria.
DR HOGENOM; CLU_000445_8_12_4; -.
DR Proteomes; UP000007883; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007883};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 346..567
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 663 AA; 72726 MW; 26AB45833C859E0D CRC64;
MSLSLRDAHR HADRILERVR GGAHDGNEVV AQSWTRCVNE YRLDPGRRHE PAVVSRAELE
DRRARRADVI ACARYEMTTL FQQLADTESA VVLTDTDGVI VHMVSTPEFG AEVGPLGLRV
GGRWSEAAAG TNGMGTCLAA AGPVSVRRED HFFPEFAQLT CSAVPVYDPQ GEIAAVLDVT
SRSSLMQQHL LVLLGMTARM IENRLLDARF RAAHPLHFHA RPEFVYTLHE GKLAIGEDGR
ILAANRSALF QLGLQSMDEI RDRRLDELFE TSLEDMLQRS SSASFHPVVM YRANAALRFF
AVARRPASDP HAPAQAVAPV ATAAANTARA AARGGVRTPD GTTFGDPRLV RHLETARRVV
ARRTPVLLTG ETGSGKEVFA RALHEASPHA GGAFVAVNCA SLPETLIESE LFGYRAGAFT
GAQRNGRRGK ILQADGGTLF LDEIGDMPLE LQARLLRVLD ERQVTPLGTE ETHPVDFQLV
SASHRHLPTL VREGRFREDL YYRLAGIELA LPALRERSDR RELLQAVLAA ESEGSGTLTP
EAERLLMDYA WPGNVRQLRH VLRSAAALAD GRPITREHLP SLQATPLAPP PVIAAPAVAP
VAAAPEPLPV KLNPIQANER QVLLQLLEQH RWNVSNVAKA LDVSRNTLYR KLHKLHIEVS
HPD
//
