ID I0ICH4_PHYMF Unreviewed; 606 AA.
AC I0ICH4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=NfeD-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF01957};
GN OrderedLocusNames=PSMK_08030 {ECO:0000313|EMBL:BAM02962.1};
OS Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01).
OC Bacteria; Planctomycetota; Phycisphaerae; Phycisphaerales;
OC Phycisphaeraceae; Phycisphaera.
OX NCBI_TaxID=1142394 {ECO:0000313|EMBL:BAM02962.1, ECO:0000313|Proteomes:UP000007881};
RN [1] {ECO:0000313|EMBL:BAM02962.1, ECO:0000313|Proteomes:UP000007881}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 102666 / KCTC 22515 / FYK2301M01
RC {ECO:0000313|Proteomes:UP000007881};
RA Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S.,
RA Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.;
RT "Complete genome sequence of Phycisphaera mikurensis NBRC 102666.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; AP012338; BAM02962.1; -; Genomic_DNA.
DR RefSeq; WP_014436182.1; NC_017080.1.
DR AlphaFoldDB; I0ICH4; -.
DR STRING; 1142394.PSMK_08030; -.
DR GeneID; 80847311; -.
DR KEGG; phm:PSMK_08030; -.
DR eggNOG; COG1030; Bacteria.
DR HOGENOM; CLU_024619_2_0_0; -.
DR OMA; QMDTPGG; -.
DR OrthoDB; 284354at2; -.
DR Proteomes; UP000007881; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd07021; Clp_protease_NfeD_like; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR029045; ClpP/crotonase-like_dom_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR002810; NfeD-like_C.
DR InterPro; IPR002825; Pept_S49_ser-pept_pro.
DR PANTHER; PTHR33507; INNER MEMBRANE PROTEIN YBBJ; 1.
DR PANTHER; PTHR33507:SF3; INNER MEMBRANE PROTEIN YBBJ; 1.
DR Pfam; PF01957; NfeD; 1.
DR Pfam; PF01972; SDH_sah; 1.
DR SUPFAM; SSF52096; ClpP/crotonase; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007881};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..606
FT /note="NfeD-like C-terminal domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003628729"
FT TRANSMEM 370..393
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 400..420
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 426..444
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 451..469
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 489..510
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 545..603
FT /note="NfeD-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF01957"
FT REGION 29..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 533..564
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..55
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..80
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 606 AA; 60835 MW; 620E17F03EDC7BDC CRC64;
MARRALLLLI CLLLLAPLAG VGAAAPGAPG AVPAPRVAEP EPEVTPAPAG PTGPAETAPP
ATEAAAATPP PAVGSPPAAT PIPRRPPLLV LPSGAEVAVI PIEGMIYDFT TDSLRRRMER
ARAGGATVFV LSLDTPGGVV TSAIDIAKLL KSTPEPTIAW INDQAYSAGS LIATSCDYLV
VAPSSSFGDS APVSMVGELA PTERAKALSP LLNEYRDNAR ANGHDYAALQ AMCVLGVELY
YVEDPATGRR HVVNQADHAV LVGGLSPAEA DEKIAAMADL AGTGSAVGRP ARELADAASA
GAWRAVEQLP SGRKLPGGRL HDGSTLYTLS QTEAIDTGIA EAEARTEADL QALLNAASVS
TVGQTWSEAL AMFLTNPFVR MGLIAIFGIG LFVEMLAPGF GLAGGVALLA LAALIGAPLL
VGLSEIWHIG LMVIGVVMIV IELLATPTFG LMGIVGVGAV LAGLVLSTVP SSGGGPVPLP
APGTGGRLAS ATIATLLAFV VTGFASLGLM KVYGRVPGLS RLVLGDAPAI DARSAPPGPD
ADGAADRGPA VGETGTVRGG GLRPSGSIAI GDRWIDAVSA GGFIEEGTAV TVVEVAGNRV
VVEAAA
//