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Database: UniProt
Entry: I0ICH4_PHYMF
LinkDB: I0ICH4_PHYMF
Original site: I0ICH4_PHYMF 
ID   I0ICH4_PHYMF            Unreviewed;       606 AA.
AC   I0ICH4;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 43.
DE   RecName: Full=NfeD-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF01957};
GN   OrderedLocusNames=PSMK_08030 {ECO:0000313|EMBL:BAM02962.1};
OS   Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01).
OC   Bacteria; Planctomycetota; Phycisphaerae; Phycisphaerales;
OC   Phycisphaeraceae; Phycisphaera.
OX   NCBI_TaxID=1142394 {ECO:0000313|EMBL:BAM02962.1, ECO:0000313|Proteomes:UP000007881};
RN   [1] {ECO:0000313|EMBL:BAM02962.1, ECO:0000313|Proteomes:UP000007881}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 102666 / KCTC 22515 / FYK2301M01
RC   {ECO:0000313|Proteomes:UP000007881};
RA   Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S.,
RA   Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.;
RT   "Complete genome sequence of Phycisphaera mikurensis NBRC 102666.";
RL   Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR   EMBL; AP012338; BAM02962.1; -; Genomic_DNA.
DR   RefSeq; WP_014436182.1; NC_017080.1.
DR   AlphaFoldDB; I0ICH4; -.
DR   STRING; 1142394.PSMK_08030; -.
DR   GeneID; 80847311; -.
DR   KEGG; phm:PSMK_08030; -.
DR   eggNOG; COG1030; Bacteria.
DR   HOGENOM; CLU_024619_2_0_0; -.
DR   OMA; QMDTPGG; -.
DR   OrthoDB; 284354at2; -.
DR   Proteomes; UP000007881; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   CDD; cd07021; Clp_protease_NfeD_like; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR029045; ClpP/crotonase-like_dom_sf.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR002810; NfeD-like_C.
DR   InterPro; IPR002825; Pept_S49_ser-pept_pro.
DR   PANTHER; PTHR33507; INNER MEMBRANE PROTEIN YBBJ; 1.
DR   PANTHER; PTHR33507:SF3; INNER MEMBRANE PROTEIN YBBJ; 1.
DR   Pfam; PF01957; NfeD; 1.
DR   Pfam; PF01972; SDH_sah; 1.
DR   SUPFAM; SSF52096; ClpP/crotonase; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007881};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..23
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           24..606
FT                   /note="NfeD-like C-terminal domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5003628729"
FT   TRANSMEM        370..393
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        400..420
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        426..444
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        451..469
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        489..510
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          545..603
FT                   /note="NfeD-like C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF01957"
FT   REGION          29..80
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          533..564
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        33..55
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        64..80
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   606 AA;  60835 MW;  620E17F03EDC7BDC CRC64;
     MARRALLLLI CLLLLAPLAG VGAAAPGAPG AVPAPRVAEP EPEVTPAPAG PTGPAETAPP
     ATEAAAATPP PAVGSPPAAT PIPRRPPLLV LPSGAEVAVI PIEGMIYDFT TDSLRRRMER
     ARAGGATVFV LSLDTPGGVV TSAIDIAKLL KSTPEPTIAW INDQAYSAGS LIATSCDYLV
     VAPSSSFGDS APVSMVGELA PTERAKALSP LLNEYRDNAR ANGHDYAALQ AMCVLGVELY
     YVEDPATGRR HVVNQADHAV LVGGLSPAEA DEKIAAMADL AGTGSAVGRP ARELADAASA
     GAWRAVEQLP SGRKLPGGRL HDGSTLYTLS QTEAIDTGIA EAEARTEADL QALLNAASVS
     TVGQTWSEAL AMFLTNPFVR MGLIAIFGIG LFVEMLAPGF GLAGGVALLA LAALIGAPLL
     VGLSEIWHIG LMVIGVVMIV IELLATPTFG LMGIVGVGAV LAGLVLSTVP SSGGGPVPLP
     APGTGGRLAS ATIATLLAFV VTGFASLGLM KVYGRVPGLS RLVLGDAPAI DARSAPPGPD
     ADGAADRGPA VGETGTVRGG GLRPSGSIAI GDRWIDAVSA GGFIEEGTAV TVVEVAGNRV
     VVEAAA
//
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