ID I0IDI0_PHYMF Unreviewed; 338 AA.
AC I0IDI0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Putative RNA polymerase sigma factor {ECO:0000313|EMBL:BAM03318.1};
GN OrderedLocusNames=PSMK_11590 {ECO:0000313|EMBL:BAM03318.1};
OS Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01).
OC Bacteria; Planctomycetota; Phycisphaerae; Phycisphaerales;
OC Phycisphaeraceae; Phycisphaera.
OX NCBI_TaxID=1142394 {ECO:0000313|EMBL:BAM03318.1, ECO:0000313|Proteomes:UP000007881};
RN [1] {ECO:0000313|EMBL:BAM03318.1, ECO:0000313|Proteomes:UP000007881}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 102666 / KCTC 22515 / FYK2301M01
RC {ECO:0000313|Proteomes:UP000007881};
RA Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S.,
RA Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.;
RT "Complete genome sequence of Phycisphaera mikurensis NBRC 102666.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AP012338; BAM03318.1; -; Genomic_DNA.
DR RefSeq; WP_014436537.1; NC_017080.1.
DR AlphaFoldDB; I0IDI0; -.
DR STRING; 1142394.PSMK_11590; -.
DR GeneID; 80847607; -.
DR KEGG; phm:PSMK_11590; -.
DR eggNOG; COG0568; Bacteria.
DR HOGENOM; CLU_820977_0_0_0; -.
DR OrthoDB; 9780321at2; -.
DR Proteomes; UP000007881; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.20.120.1810; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000007881};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 302..328
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
SQ SEQUENCE 338 AA; 38773 MW; FB98F3415F99AA8C CRC64;
MNSFALAGNP GTLAVSPLAQ ARRLGGIDYV QDGLSEEEAA TVREILGEKY EYMDHPAFEL
PREEAEEQLF DDPEPIGHAD VSWYHPAMSW IDEPRLGRSA TKTLTAAEER VIFAQFNYCR
FRVFNLKQEL VDQTHRDPAL VREMLTWYEK AEGYREQIAG LNLALVLAMA KRIRGADVDW
GEMISEGNMA LLRSIDKFDI TRGFKFSTYA CRAILKAFSR QGIKHSKYRS TFPTDFDPKF
ERSNHQSEKN EEHETDCVDE LREIIRRNKA SLSDVERGVI ERRFAVGDNA RIDAKGDPRP
LTLEQVGKIL GVTKERVRQI QTEALDKIRD HFEGDFLR
//
