ID I0IN14_LEPFC Unreviewed; 476 AA.
AC I0IN14;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Putative TPR-domain containing protein {ECO:0000313|EMBL:BAM06663.1};
GN OrderedLocusNames=LFE_0959 {ECO:0000313|EMBL:BAM06663.1};
OS Leptospirillum ferrooxidans (strain C2-3).
OC Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae;
OC Leptospirillum.
OX NCBI_TaxID=1162668 {ECO:0000313|EMBL:BAM06663.1, ECO:0000313|Proteomes:UP000007382};
RN [1] {ECO:0000313|EMBL:BAM06663.1, ECO:0000313|Proteomes:UP000007382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C2-3 {ECO:0000313|EMBL:BAM06663.1,
RC ECO:0000313|Proteomes:UP000007382};
RX PubMed=22815442; DOI=10.1128/JB.00696-12;
RA Fujimura R., Sato Y., Nishizawa T., Oshima K., Kim S.-W., Hattori M.,
RA Kamijo T., Ohta H.;
RT "Complete Genome Sequence of Leptospirillum ferrooxidans Strain C2-3,
RT Isolated from a Fresh Volcanic Ash Deposit on the Island of Miyake,
RT Japan.";
RL J. Bacteriol. 194:4122-4123(2012).
RN [2] {ECO:0000313|Proteomes:UP000007382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C2-3 {ECO:0000313|Proteomes:UP000007382};
RA Fujimura R., Sato Y., Nishizawa T., Nanba K., Oshima K., Hattori M.,
RA Kamijo T., Ohta H.;
RT "The complete genome sequence of the pioneer microbe on fresh volcanic
RT deposit, Leptospirillum ferrooxidans strain C2-3.";
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AP012342; BAM06663.1; -; Genomic_DNA.
DR RefSeq; WP_014449154.1; NC_017094.1.
DR AlphaFoldDB; I0IN14; -.
DR STRING; 1162668.LFE_0959; -.
DR GeneID; 78148756; -.
DR KEGG; lfc:LFE_0959; -.
DR PATRIC; fig|1162668.3.peg.1104; -.
DR eggNOG; COG0457; Bacteria.
DR HOGENOM; CLU_587668_0_0_0; -.
DR OrthoDB; 9815059at2; -.
DR Proteomes; UP000007382; Chromosome.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.30; Dynein light chain 2a, cytoplasmic; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR031101; Ctr9.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR Pfam; PF14559; TPR_19; 1.
DR Pfam; PF13174; TPR_6; 1.
DR SMART; SM00028; TPR; 4.
DR SUPFAM; SSF103196; Roadblock/LC7 domain; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007382};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 19..52
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 87..120
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 214..247
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 140..159
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 165..188
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..349
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 476 AA; 53690 MW; 40EDC730B0BBCC9A CRC64;
MTPEEISALE ERIEANPKSR SFLQLAEAYI ELGKTDQAQA LLSKGVEYYP YYLAARITLG
QVQMEKGLIP EAISNFEFVS RTIPDNLIAQ KSLAQLYYKN NDMEKAKEAI TVATSLSPDD
PEILELSEKI KTPVTAPIVK EPLKEKDESP LNNDQNRDYF SENIESKRDE VPEPESPMES
VTTDPLEIPL PKEPEEQIQN QTPDNDEMDM LELLPKTETM GDLFMEQKRY PQAEHIYSEV
LKANPGNFQV SQKLALAKAH FPLSALITEA AEEQHLIEED VQGEEPVVEL ESFPEPAPTE
NIAADISDRP LEEQEPLFQK TEKSPQSSQK TTTLHIDKPQ PPKQYSQSDR PITEDPEDLV
NRIRQRLHRD VLDVIWASSD GLAITGNDRD GSDEVNQIFA GEGVEFLRQI TELGSALGKG
EVQDGFIWMN EGILYFHDQG DNGALFIWLH PNANVGRCRY IIGQEIGSHN GLHQTR
//
