ID I0IWA5_SPHMC Unreviewed; 117 AA.
AC I0IWA5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Large ribosomal subunit protein uL18 {ECO:0000256|ARBA:ARBA00035197, ECO:0000256|HAMAP-Rule:MF_01337};
GN Name=rplR {ECO:0000256|HAMAP-Rule:MF_01337};
GN ORFNames=AN936_20730 {ECO:0000313|EMBL:ALH82696.1}, LH19_24150
GN {ECO:0000313|EMBL:ALJ15981.1};
OS Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=33050 {ECO:0000313|EMBL:BAM09554.1};
RN [1] {ECO:0000313|EMBL:BAM09554.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=BSN11 {ECO:0000313|EMBL:BAM09554.1}, and NBRC 15033T
RC {ECO:0000313|EMBL:BAM09500.1};
RX PubMed=22324315; DOI=10.1111/j.1574-6968.2012.02525.x;
RA Hotta Y., Sato H., Hosoda A., Tamura H.;
RT "MALDI-TOF MS analysis of ribosomal proteins coded in S10 and spc operons
RT rapidly classified the Sphingomonadaceae as alkylphenol polyethoxylate-
RT degrading bacteria from the environment.";
RL FEMS Microbiol. Lett. 330:23-29(2012).
RN [2] {ECO:0000313|EMBL:ALH82696.1, ECO:0000313|Proteomes:UP000058074}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EY-1 {ECO:0000313|EMBL:ALH82696.1,
RC ECO:0000313|Proteomes:UP000058074};
RX PubMed=26634754;
RA Ohtsubo Y., Nagata Y., Numata M., Tsuchikane K., Hosoyama A., Yamazoe A.,
RA Tsuda M., Fujita N., Kawai F.;
RT "Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-
RT Degrading Sphingopyxis macrogoltabida Strain EY-1.";
RL Genome Announc. 3:0-0(2015).
RN [3] {ECO:0000313|EMBL:ALJ15981.1, ECO:0000313|Proteomes:UP000062472}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=203 {ECO:0000313|EMBL:ALJ15981.1,
RC ECO:0000313|Proteomes:UP000062472};
RA Ohtsubo Y., Nagata Y., Numata M., Tsuchikane K., Hosoyama A., Yamazoe A.,
RA Tsuda M., Fujita N., Kawai F.;
RT "Complete genome sequence of a mutant derivative (NBRC15033) of
RT polyethylene glycol-degrading strain Sphingopyxis macrogoltabidus strain
RT 203.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This is one of the proteins that bind and probably mediate
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. {ECO:0000256|HAMAP-
CC Rule:MF_01337}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
CC {ECO:0000256|HAMAP-Rule:MF_01337}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL18 family.
CC {ECO:0000256|ARBA:ARBA00007116, ECO:0000256|HAMAP-Rule:MF_01337}.
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DR EMBL; CP012700; ALH82696.1; -; Genomic_DNA.
DR EMBL; CP009429; ALJ15981.1; -; Genomic_DNA.
DR EMBL; AB675231; BAM09500.1; -; Genomic_DNA.
DR EMBL; AB675285; BAM09554.1; -; Genomic_DNA.
DR RefSeq; WP_054589699.1; NZ_CP013344.1.
DR AlphaFoldDB; I0IWA5; -.
DR STRING; 33050.AN936_20730; -.
DR KEGG; smag:AN936_20730; -.
DR KEGG; smaz:LH19_24150; -.
DR PATRIC; fig|33050.5.peg.4296; -.
DR OrthoDB; 9810939at2; -.
DR Proteomes; UP000058074; Chromosome.
DR Proteomes; UP000062472; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00432; Ribosomal_L18_L5e; 1.
DR Gene3D; 3.30.420.100; -; 1.
DR HAMAP; MF_01337_B; Ribosomal_L18_B; 1.
DR InterPro; IPR005484; Ribosomal_uL18.
DR InterPro; IPR004389; Ribosomal_uL18_bac-type.
DR NCBIfam; TIGR00060; L18_bact; 1.
DR PANTHER; PTHR12899; 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; 1.
DR PANTHER; PTHR12899:SF3; 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; 1.
DR Pfam; PF00861; Ribosomal_L18p; 1.
DR SUPFAM; SSF53137; Translational machinery components; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000058074};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01337};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01337};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01337};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01337}.
SQ SEQUENCE 117 AA; 12523 MW; C3544A641D38597D CRC64;
MAHLTSFQKR RQRVRTALRQ RAAGRPRLSV HRSGRHIYAQ LIDDAAGKTL AAASTLDKDV
RGKTGATTAA AADVGKRLAD AAKKAGVTQV VFDRGGFLFH GRIKALADAA REGGLEF
//
