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Database: UniProt
Entry: I0JTW0_WHEAT
LinkDB: I0JTW0_WHEAT
Original site: I0JTW0_WHEAT 
ID   I0JTW0_WHEAT            Unreviewed;       276 AA.
AC   I0JTW0;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   SubName: Full=E3 ubiquitin-protein ligase {ECO:0000313|EnsemblPlants:TraesCS3D02G020800.1};
GN   ORFNames=CFC21_045347 {ECO:0000313|EMBL:KAF7034314.1};
OS   Triticum aestivum (Wheat).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX   NCBI_TaxID=4565 {ECO:0000313|EMBL:CCG48012.1};
RN   [1] {ECO:0000313|EMBL:CCG48012.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bartos J., Vlcek C., Choulet F., Dzunkova M., Cvikova K., Safar J.,
RA   Simkova H., Paces J., Strnad H., Sourdille P., Berges H., Cattonaro F.,
RA   Feuillet C., Dolezel J.;
RT   "Intraspecific sequence comparisons reveal similar rates of non-collinear
RT   gene insertion in the B and D genomes of bread wheat.";
RL   Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KAF7034314.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAF7034314.1};
RX   PubMed=29069494;
RA   Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT   "The first near-complete assembly of the hexaploid bread wheat genome,
RT   Triticum aestivum.";
RL   Gigascience 6:1-7(2017).
RN   [3] {ECO:0000313|EnsemblPlants:TraesCS3D02G020800.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chinese Spring
RC   {ECO:0000313|EnsemblPlants:TraesCS3D02G020800.1};
RX   PubMed=30115783; DOI=10.1126/science.aar7191;
RG   International wheat genome sequencing consortium (IWGSC);
RT   "Shifting the limits in wheat research and breeding using a fully annotated
RT   reference genome.";
RL   Science 361:EAAR7191-EAAR7191(2018).
RN   [4] {ECO:0000313|EnsemblPlants:TraesCS3D02G020800.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (OCT-2018) to UniProtKB.
RN   [5] {ECO:0000313|EMBL:KAF7034314.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAF7034314.1};
RA   Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT   "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT   aestivum) genome.";
RL   Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the SINA (Seven in absentia) family.
CC       {ECO:0000256|ARBA:ARBA00009119}.
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DR   EMBL; HE774676; CCG48012.1; -; Genomic_DNA.
DR   EMBL; CM022219; KAF7034314.1; -; Genomic_DNA.
DR   STRING; 4565.I0JTW0; -.
DR   PaxDb; 4565-Traes_3DS_FA0725BB1-1; -.
DR   EnsemblPlants; TraesCS3D02G020800.1; TraesCS3D02G020800.1; TraesCS3D02G020800.
DR   Gramene; TraesCS3D02G020800.1; TraesCS3D02G020800.1; TraesCS3D02G020800.
DR   Gramene; TraesCS3D03G0036200.1; TraesCS3D03G0036200.1.CDS; TraesCS3D03G0036200.
DR   Gramene; TraesRN3D0100040500.1; TraesRN3D0100040500.1; TraesRN3D0100040500.
DR   eggNOG; KOG3002; Eukaryota.
DR   OMA; FCAEPAN; -.
DR   OrthoDB; 370799at2759; -.
DR   UniPathway; UPA00143; -.
DR   Proteomes; UP000019116; Chromosome 3D.
DR   Proteomes; UP000815260; Chromosome 3D.
DR   ExpressionAtlas; I0JTW0; baseline.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR   GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR013010; Znf_SIAH.
DR   PANTHER; PTHR10315; E3 UBIQUITIN PROTEIN LIGASE SIAH; 1.
DR   PANTHER; PTHR10315:SF114; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR   Pfam; PF21362; Sina_RING; 1.
DR   Pfam; PF21361; Sina_ZnF; 1.
DR   SUPFAM; SSF49599; TRAF domain-like; 1.
DR   PROSITE; PS51081; ZF_SIAH; 1.
PE   3: Inferred from homology;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00455};
KW   Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00455};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00455}.
FT   DOMAIN          97..156
FT                   /note="SIAH-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51081"
SQ   SEQUENCE   276 AA;  30196 MW;  5863DCF0AD94456B CRC64;
     MAKKAGAERD AAAESCAQKK ARIEYEAKAA ASKITVNLDH KLLECSACCS PLAPPLFQCT
     NGHIACSECR TNAEYSCSFC AEPANTRCDI MERVLGGMTA PCSFREFGCS ATIPFTKKLT
     QEESCLHAPC HCPIPYCRLY ANRGQCLREH IETKHCLVPY GDATAGSLSP VRVCDSEPAR
     LVFLDARAVF LLVVERSGPS GRAVSVVQLV SEPVKEEEEK DFKYKIQVHT RAGVLSLSGE
     TQSVGRLMRP YQAAASLFVS DDVWSPQDSP VYLEFK
//
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