ID I0YL53_COCSC Unreviewed; 624 AA.
AC I0YL53;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DNA mismatch repair proteins mutS family domain-containing protein {ECO:0000259|SMART:SM00534};
GN ORFNames=COCSUDRAFT_38365 {ECO:0000313|EMBL:EIE19122.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE19122.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE19122.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE19122.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE19122.1}.
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DR EMBL; AGSI01000020; EIE19122.1; -; Genomic_DNA.
DR RefSeq; XP_005643666.1; XM_005643609.1.
DR AlphaFoldDB; I0YL53; -.
DR STRING; 574566.I0YL53; -.
DR GeneID; 17037052; -.
DR KEGG; csl:COCSUDRAFT_38365; -.
DR eggNOG; ENOG502QT8G; Eukaryota.
DR OrthoDB; 5490617at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0030983; F:mismatched DNA binding; IEA:InterPro.
DR GO; GO:0006298; P:mismatch repair; IEA:InterPro.
DR GO; GO:0045910; P:negative regulation of DNA recombination; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR000432; DNA_mismatch_repair_MutS_C.
DR InterPro; IPR036187; DNA_mismatch_repair_MutS_sf.
DR InterPro; IPR005747; MutS2.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR48378:SF1; DNA MISMATCH REPAIR PROTEINS MUTS FAMILY DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48378; DNA MISMATCH REPAIR PROTEINS MUTS FAMILY DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR Pfam; PF00488; MutS_V; 1.
DR PIRSF; PIRSF005814; MutS_YshD; 1.
DR SMART; SM00534; MUTSac; 1.
DR SUPFAM; SSF48334; DNA repair protein MutS, domain III; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 405..579
FT /note="DNA mismatch repair proteins mutS family"
FT /evidence="ECO:0000259|SMART:SM00534"
FT REGION 342..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 571..598
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 624 AA; 66207 MW; 4A39E5FC0D6E03BC CRC64;
MATLEWPRLC SHVAQFASTT LGRQEALQLQ LLAETRAVNV LEAEYAADLD FGGISTSVAQ
EGIKRASRGG MLTAAQLAAV AGLLAGAVRL QRAILSAAGQ EGRLTEESAL WPVVSTVKGL
PGHAEIVAGV NSALDEGAKV REGASEDVRR TRGRCRTLEG RLRSLLKGFQ GEVSEQSGRL
CCGRLCVAVA AAEKPPRGVL LGSAAGIIYL EPPAAVPLNN ELAAARGEAY AAEEAVLWRL
TGLVVDAEED VRRALEIVLW LDLTAAKARY GRWINGELPT FAEFARTTKA RTSRQKEAQA
LQRATASPKE ADDEFLIRLR RLRHPLLHAD YLIWKEAAAR NQPQSSRAAS AGPLRRLSNR
KDVMARNSGM LVEDEPSEEE AASEEGHEGT PKPPVPIDIC MKPDTRCVII TGPNTGGKTA
TLKAFGLAVL MAKAGLPVPA AAPVRLAPFS GVLADIGDEQ SLAANLSTFS GHLRRIQALR
READGRSLVL LDEVGTGTDP AEGAALGIAL LRALAAGGAR GAAITDGRFE NASVEFDEAA
LAPTYRLMWG IPGRSNALNI ASRLGLNADI IADARDRMGT AQAEVDDAIA ELEGLRKAAE
GDEVAGIKLK KQATTIQVKL SQMR
//
