ID I0YN80_COCSC Unreviewed; 444 AA.
AC I0YN80;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 22-FEB-2023, entry version 37.
DE SubName: Full=Suf-domain-containing protein {ECO:0000313|EMBL:EIE19849.1};
DE Flags: Fragment;
GN ORFNames=COCSUDRAFT_2050 {ECO:0000313|EMBL:EIE19849.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE19849.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE19849.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE19849.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE19849.1}.
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DR EMBL; AGSI01000017; EIE19849.1; -; Genomic_DNA.
DR RefSeq; XP_005644393.1; XM_005644336.1.
DR AlphaFoldDB; I0YN80; -.
DR STRING; 574566.I0YN80; -.
DR GeneID; 17037823; -.
DR KEGG; csl:COCSUDRAFT_2050; -.
DR eggNOG; KOG1914; Eukaryota.
DR OrthoDB; 23291at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR Gene3D; 1.25.40.1040; -; 1.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045243; Rna14-like.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR19980:SF0; CLEAVAGE STIMULATION FACTOR SUBUNIT 3; 1.
DR PANTHER; PTHR19980; RNA CLEAVAGE STIMULATION FACTOR; 1.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 6.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 348..443
FT /note="Suppressor of forked"
FT /evidence="ECO:0000259|Pfam:PF05843"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EIE19849.1"
FT NON_TER 444
FT /evidence="ECO:0000313|EMBL:EIE19849.1"
SQ SEQUENCE 444 AA; 49845 MW; 6125994330F3B67D CRC64;
LLAEQKAVLE EFLEIFPTAA LYWQRYAEAE IRAGNVSGAK SVFSRCLLTC LSVDLWRTYL
RFIKQACRTT YQYISLQHYW QHRSDAPRGP DGMDEVRKAF EFTLDKIGAD IGAGPLWQEY
IAFLQGPPVN SPAFLTLFSG GVAGQEDTQR FTLVRRAYQR ALVVPCASLE ALWRSYEQFE
QSGSNKALAR RILDEQRPSI KGINRCAGMG GLAQASQASA WRDYIMWERQ NGQRLDGPLL
ATRVALAYEQ ALMPLRHFPE VWLEFARWQA AEGGSGPAAA ASVLGQGRKA LFSCLLLHFA
AADLEESRGS TEAARRVYED LVAGLVPKED APPDQAASPQ LSPELGGLAW VQYMRWSRRA
ESVNASRKLF VRCRKWPECP WQVYAANALM EWQSERSDKI PRNIFELGLK AFLGEAGYVL
AYADWLLSIG DADNAKQLFE RALA
//
