ID I0YP69_COCSC Unreviewed; 396 AA.
AC I0YP69;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=26S proteasome AAA-ATPase subunit RPT6a {ECO:0000313|EMBL:EIE20188.1};
GN ORFNames=COCSUDRAFT_67523 {ECO:0000313|EMBL:EIE20188.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE20188.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE20188.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE20188.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- SIMILARITY: Belongs to the AAA ATPase family.
CC {ECO:0000256|ARBA:ARBA00006914, ECO:0000256|RuleBase:RU003651}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE20188.1}.
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DR EMBL; AGSI01000016; EIE20188.1; -; Genomic_DNA.
DR RefSeq; XP_005644732.1; XM_005644675.1.
DR AlphaFoldDB; I0YP69; -.
DR STRING; 574566.I0YP69; -.
DR GeneID; 17038164; -.
DR KEGG; csl:COCSUDRAFT_67523; -.
DR eggNOG; KOG0728; Eukaryota.
DR OrthoDB; 360215at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd19502; RecA-like_PAN_like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR032501; Prot_ATP_ID_OB_2nd.
DR PANTHER; PTHR23073; 26S PROTEASOME REGULATORY SUBUNIT; 1.
DR PANTHER; PTHR23073:SF155; 26S PROTEASOME REGULATORY SUBUNIT 10B; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF16450; Prot_ATP_ID_OB_C; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU003651};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU003651};
KW Proteasome {ECO:0000256|ARBA:ARBA00022942, ECO:0000313|EMBL:EIE20188.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 171..311
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT COILED 17..51
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 396 AA; 44293 MW; 4AD6F1609F5479E1 CRC64;
MGRALGDGLK SYYKTKIEEL EILARDKQHN LRRLEAQRNE LNTKVRLLRE ELQLLQEPGS
YVGEVLKVMG KNKVLVKVHP EGKYVVDLDK SIDITQVTTG ARVALRNDSY TLHLLLPTKV
DPLVSLMKVE KVPDSTYDMI GGLDQQIKEI KEVIELPIKH PELFESLGVA QPKGVLLYGP
PGTGKTLLAR AVAHHTDCTF IRVSGSELVQ KYIGEGSRMV RELFVMAREH APSIIFMDEV
DSIGSARTDN GGGGGDSEVQ RTMLELLNQL DGFEATNKIK VLMATNRIDI LDPALLRPGR
IDRKIEFPNP NESSRADILR IHSRKMNLVR GIDLRKIADK MTGASGAELK ACCTEAGMFA
LRERRVHVTQ EDFEMAVAKV MKKDSDANMS LRKLFK
//
