ID I0YVS2_COCSC Unreviewed; 166 AA.
AC I0YVS2;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Homeodomain-like protein {ECO:0000313|EMBL:EIE22491.1};
DE Flags: Fragment;
GN ORFNames=COCSUDRAFT_7682 {ECO:0000313|EMBL:EIE22491.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE22491.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE22491.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE22491.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE22491.1}.
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DR EMBL; AGSI01000010; EIE22491.1; -; Genomic_DNA.
DR RefSeq; XP_005647035.1; XM_005646978.1.
DR AlphaFoldDB; I0YVS2; -.
DR STRING; 574566.I0YVS2; -.
DR GeneID; 17040477; -.
DR KEGG; csl:COCSUDRAFT_7682; -.
DR eggNOG; KOG0048; Eukaryota.
DR OrthoDB; 317702at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00167; SANT; 3.
DR Gene3D; 1.10.10.60; Homeodomain-like; 3.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR45614; MYB PROTEIN-RELATED; 1.
DR PANTHER; PTHR45614:SF194; TRANSCRIPTION FACTOR MYB3R-5; 1.
DR Pfam; PF00249; Myb_DNA-binding; 3.
DR SMART; SM00717; SANT; 3.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51294; HTH_MYB; 3.
DR PROSITE; PS50090; MYB_LIKE; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:EIE22491.1};
KW Homeobox {ECO:0000313|EMBL:EIE22491.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 12..57
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 14..57
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 58..113
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 58..109
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 110..160
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 114..164
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EIE22491.1"
FT NON_TER 166
FT /evidence="ECO:0000313|EMBL:EIE22491.1"
SQ SEQUENCE 166 AA; 19424 MW; 359DE0223889DF21 CRC64;
KTGAPTRRSA VGGWTAEEDE VLRRAVSYYG AKNWKKIAEH FEDRTDVQCL HRWQKVLNPE
LVKGPWTPEE DLKIIELVTR LGAKRWSLIA KDLPGRIGKQ CRERWHNHLD PTIKRGDWTK
EEDSMLVEKH AEYGNQWAKI AQFLPGRTDN AIKNHWNSTM RRKVES
//
