ID I0Z275_COCSC Unreviewed; 779 AA.
AC I0Z275;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=RWP-RK domain-containing protein {ECO:0000259|PROSITE:PS51519};
GN ORFNames=COCSUDRAFT_46926 {ECO:0000313|EMBL:EIE24744.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE24744.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE24744.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE24744.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE24744.1}.
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DR EMBL; AGSI01000005; EIE24744.1; -; Genomic_DNA.
DR RefSeq; XP_005649288.1; XM_005649231.1.
DR AlphaFoldDB; I0Z275; -.
DR STRING; 574566.I0Z275; -.
DR GeneID; 17042745; -.
DR KEGG; csl:COCSUDRAFT_46926; -.
DR eggNOG; KOG2256; Eukaryota.
DR OrthoDB; 318164at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR InterPro; IPR045012; NLP.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR32002:SF35; PROTEIN NLP6; 1.
DR PANTHER; PTHR32002; PROTEIN NLP8; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 351..439
FT /note="RWP-RK"
FT /evidence="ECO:0000259|PROSITE:PS51519"
FT REGION 309..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 414..519
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 569..595
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..464
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 477..491
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 569..584
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 779 AA; 84219 MW; 5104D9AEC2CCDD20 CRC64;
MSAGQTIVSW DMRYPAAFTY NPQNSRESAS QHAQLNMKLA QVVVKFTSSL SSTGTGTLSQ
IWLPSISEDG SVVLGTQGVP FSVSGTVDLL ALFRCISCRF KFTTDVTDPS NMGVVGRVFA
SGEPEFSHNV QTYSKSVYLR VSDAQRCRVH STMLLPMYMD PQRDHPFAVF EVCQTEKNVL
FPSLVDLFQR CLEDVNLYTV DIEKHSMGIG LRCWPSSLDY TGKDSASVAT FAPEAAACTD
METLCSADSL QRLKAASVNG ATDVHGEEVL RASSGVGGGK SEGMARLVSV GNRLELDLEP
LLMTSKGGGG GGGGNCGLES GTQGSEALGS RRPPMRLEVG LPAAAAALLN GFDGDKARLK
GQLSSFGLQY AAVPPRDMAQ FGVGLREAAA NLRICPTTLK RACRRHGITR WPRRQLAKLN
RSEGSKSDGS GDLPNIKVEG SYRSAARLSG QQPAVSSAAS PRTSAQLGAE RREGVTTRSF
SAATSAGRPA APSGSSPGIF SPLDFPPDMQ QQPFYLSGNP SSTGILDLFQ SIGPSGSAGM
DDLEALQERD PEFYNYLKQT DSGLLDFKED DSDEEEAGGT SESIQDGEEE ERGNERLPVI
ESGAAEEQLE DQEILTPKTL DAWCLEATQH ASLRAMRKLL KVFRVACHYG DSEAEVHETL
RATSSSVFNK LLIFMLKEAD GIFRNLLDLP DDAAILSSSF KKTKSGMLVF ILRKLRTSIP
FMGYFQRLQR KYMRQAISIF STNEAAPRVQ ALVFVRQMAV MLPEPAMDQA VKVSANAII
//
