ID I0Z561_COCSC Unreviewed; 363 AA.
AC I0Z561;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 22-FEB-2023, entry version 33.
DE SubName: Full=Pseudouridine synthase {ECO:0000313|EMBL:EIE25780.1};
GN ORFNames=COCSUDRAFT_40052 {ECO:0000313|EMBL:EIE25780.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE25780.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE25780.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE25780.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a uridine in RNA = a pseudouridine in RNA;
CC Xref=Rhea:RHEA:48348, Rhea:RHEA-COMP:12068, Rhea:RHEA-COMP:12069,
CC ChEBI:CHEBI:65314, ChEBI:CHEBI:65315;
CC Evidence={ECO:0000256|ARBA:ARBA00000073};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE25780.1}.
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DR EMBL; AGSI01000003; EIE25780.1; -; Genomic_DNA.
DR RefSeq; XP_005650324.1; XM_005650267.1.
DR AlphaFoldDB; I0Z561; -.
DR STRING; 574566.I0Z561; -.
DR GeneID; 17043784; -.
DR KEGG; csl:COCSUDRAFT_40052; -.
DR eggNOG; KOG1919; Eukaryota.
DR OrthoDB; 11448at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR CDD; cd02869; PseudoU_synth_RluA_like; 1.
DR Gene3D; 3.30.2350.10; Pseudouridine synthase; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006224; PsdUridine_synth_RluA-like_CS.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR PANTHER; PTHR21600; MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE; 1.
DR PANTHER; PTHR21600:SF52; RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTIC; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS01129; PSI_RLU; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007264}.
FT DOMAIN 132..298
FT /note="Pseudouridine synthase RsuA/RluA-like"
FT /evidence="ECO:0000259|Pfam:PF00849"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 40350 MW; 8FCCE55A975BB401 CRC64;
MVVQESQENS QTRGSGWQKP PQFERQREGD DVIIIRQPAP REGTLLEIAA EVSDLTLDVV
SGLIDLGAVY YGETEAPGQA PKWRRANRLA EAAPHHPIKQ GQWVRVHPNP KRYPAAQTTD
WAARVIHLDA DFCVVNKPAR IPVQSHESNS VETVPRCLVK ALGLEHLWML HRLDYCTTGV
LLLGRNEQSS RRFMQDMEAH KVQKQYKVLT PVPVEAGLEV VHYMYPGPFG SSLEVMAGKG
LRARGPRLLS QQPISTGKEW KKCVLKIVDT KLPLQVYEST VNLSFGGRTH QIRAQLAAIG
APVIGDVMYG AIAGATVSDS AIADNDLIRR IDDCSQIDGP IGLHAYSMTW EDRTYKAVAP
WEE
//