ID I0Z5E8_COCSC Unreviewed; 268 AA.
AC I0Z5E8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=PGPD14 protein {ECO:0000313|EMBL:EIE25867.1};
GN ORFNames=COCSUDRAFT_35432 {ECO:0000313|EMBL:EIE25867.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE25867.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE25867.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE25867.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE25867.1}.
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DR EMBL; AGSI01000003; EIE25867.1; -; Genomic_DNA.
DR RefSeq; XP_005650411.1; XM_005650354.1.
DR AlphaFoldDB; I0Z5E8; -.
DR STRING; 574566.I0Z5E8; -.
DR GeneID; 17043871; -.
DR KEGG; csl:COCSUDRAFT_35432; -.
DR eggNOG; KOG1940; Eukaryota.
DR OrthoDB; 325136at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16464; RING-H2_Pirh2-like; 1.
DR Gene3D; 2.20.28.10; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039512; RCHY1_zinc-ribbon.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR008913; Znf_CHY.
DR InterPro; IPR037274; Znf_CHY_sf.
DR InterPro; IPR017921; Znf_CTCHY.
DR InterPro; IPR037275; Znf_CTCHY_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR21319; RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR21319:SF20; RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF05495; zf-CHY; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR Pfam; PF14599; zinc_ribbon_6; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF161219; CHY zinc finger-like; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF161245; Zinc hairpin stack; 1.
DR PROSITE; PS51266; ZF_CHY; 1.
DR PROSITE; PS51270; ZF_CTCHY; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00601}.
FT DOMAIN 1..77
FT /note="CHY-type"
FT /evidence="ECO:0000259|PROSITE:PS51266"
FT DOMAIN 79..143
FT /note="CTCHY-type"
FT /evidence="ECO:0000259|PROSITE:PS51270"
FT DOMAIN 144..186
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 268 AA; 30002 MW; 026B653C650965D2 CRC64;
MGLGDHGCKH YRRRCQMVAP CCGEVFWCRH CHNEAKTTNE WDPSKRHELD RTTVRSLVCA
LCDLRQPVAS LCAGCGCEFG AYSCLKCCFF DDDLHKQQFH CEACGICRVG GASNFFHCNT
CGCCYANSLQ GNHVCVENSM RQNCPVCFEY LFDSVRPTAV LPCGHTIHSE CLKDMEKNRQ
LLCPICMKTY ADLAPIWRRI DQEVADTPMP TDYANWVAHI LCNDCNQAGH VPFHILGLKC
PHCSSYNTRR LAIDRNGPSP AANSPGPV
//
