ID I0Z731_COCSC Unreviewed; 198 AA.
AC I0Z731;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN ORFNames=COCSUDRAFT_39546 {ECO:0000313|EMBL:EIE26450.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE26450.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE26450.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE26450.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE26450.1}.
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DR EMBL; AGSI01000002; EIE26450.1; -; Genomic_DNA.
DR RefSeq; XP_005650994.1; XM_005650937.1.
DR AlphaFoldDB; I0Z731; -.
DR GeneID; 17044460; -.
DR KEGG; csl:COCSUDRAFT_39546; -.
DR eggNOG; ENOG502RZB5; Eukaryota.
DR OrthoDB; 1408812at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR28498; ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7; 1.
DR PANTHER; PTHR28498:SF1; ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT TRANSMEM 139..157
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 56..92
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 198 AA; 22462 MW; 0B424D6B1790AA84 CRC64;
MLDEPIPSVT RLNFLFEKIF SRALQVLEKG HVKCYIAERS QRKVFQVRGS RPSDHYIVFP
RHYCSCQAFL YVVVGHDNPL CKHQLAARLA QALHRSHNIT VSDEDMHDTA VFGRAHALTG
MEKAQSLMPH PTMHMPSKTT VLLCVVVLHV VALSYLMRAA QKAQKAREAP RKVNCVYEWA
SLAIPRQNIR IPLGITKA
//
