ID I0Z7D1_COCSC Unreviewed; 445 AA.
AC I0Z7D1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=EF-hand domain-containing protein {ECO:0000259|PROSITE:PS50222};
GN ORFNames=COCSUDRAFT_39616 {ECO:0000313|EMBL:EIE26550.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE26550.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE26550.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE26550.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE26550.1}.
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DR EMBL; AGSI01000002; EIE26550.1; -; Genomic_DNA.
DR RefSeq; XP_005651094.1; XM_005651037.1.
DR AlphaFoldDB; I0Z7D1; -.
DR STRING; 574566.I0Z7D1; -.
DR GeneID; 17044560; -.
DR KEGG; csl:COCSUDRAFT_39616; -.
DR eggNOG; KOG4629; Eukaryota.
DR OrthoDB; 1221661at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR Gene3D; 1.10.238.10; EF-hand; 1.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR016688; MscS-like_plants/fungi.
DR InterPro; IPR006685; MscS_channel_2nd.
DR PANTHER; PTHR31618; MECHANOSENSITIVE ION CHANNEL PROTEIN 5; 1.
DR PANTHER; PTHR31618:SF1; MECHANOSENSITIVE ION CHANNEL PROTEIN 6; 1.
DR Pfam; PF00924; MS_channel_2nd; 1.
DR SUPFAM; SSF47473; EF-hand; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
DR PROSITE; PS50222; EF_HAND_2; 1.
PE 4: Predicted;
KW Calcium {ECO:0000256|ARBA:ARBA00022837};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 201..220
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 226..244
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 148..183
FT /note="EF-hand"
FT /evidence="ECO:0000259|PROSITE:PS50222"
SQ SEQUENCE 445 AA; 49952 MW; F7B02A80FCC56E9C CRC64;
MLMFGDDDVR PAEVQLTYET VRKVLLCLLL ICVADLIKAV LTKYVSGHFH NSLHFTKMQD
ALNKGAAGNL HDADERELQS KLKVLVKHIR ENKLRITFTD ALGKAALSEG DGVSSQKEAR
RLAFYLFWNV RASHDREFVL LEDLCCFLPE DKARAALSTL DCDGDGKISL DDMRDAVISI
YKERKHLALT LRDTKGVVGR LEGIFAVIIH TVFVWAYLVI FNVDIAKVWA TITTILLAFV
FVFGNSIRNI YEAVIFLFVV HPFDVGDVLL IGAESTWHQV EEVALQNIVL RRADGVRIFF
PITKLSVEPV LNVSRSNNRW EGFKVLVDIS TPAATFDCVD AAVAAHLAAN PNDFTGKHLV
VANNAGDPLK YMLCVWWEYC HQGTELRRMS LGRHGLYMVI TKALLEAGVR YTLPPYENMT
AALLRPQGEG QAYMPSFLQR GALRL
//