ID I0Z8U8_COCSC Unreviewed; 1365 AA.
AC I0Z8U8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=p-loop containing nucleoside triphosphate hydrolase protein {ECO:0000313|EMBL:EIE27067.1};
GN ORFNames=COCSUDRAFT_38836 {ECO:0000313|EMBL:EIE27067.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE27067.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE27067.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE27067.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC6 subfamily.
CC {ECO:0000256|ARBA:ARBA00006793}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE27067.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGSI01000001; EIE27067.1; -; Genomic_DNA.
DR RefSeq; XP_005651611.1; XM_005651554.1.
DR STRING; 574566.I0Z8U8; -.
DR GeneID; 17045082; -.
DR KEGG; csl:COCSUDRAFT_38836; -.
DR eggNOG; KOG0250; Eukaryota.
DR OrthoDB; 78166at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0051276; P:chromosome organization; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR19306; STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6; 1.
DR PANTHER; PTHR19306:SF6; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6; 1.
DR Pfam; PF02463; SMC_N; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000313|EMBL:EIE27067.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..1365
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003637564"
FT DOMAIN 271..1316
FT /note="RecF/RecN/SMC N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02463"
FT REGION 60..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 915..982
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1001..1023
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 584..696
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1043..1084
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 75..91
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..134
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..165
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..219
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 932..961
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1365 AA; 152041 MW; B67DC76702A1F9B1 CRC64;
MTTMLCLLWR AQLQWVLQAL QTTFHGSNYD DGDEEDIFWE DVFGEGAKVK DVKLSDAAKA
NQKELQKGQA LKERPPLQNR NNRTMTPTGT GKRPACQLAG RTAKRRAPLD DTAQKDNRGI
AEEAAEDTPM MQHPRRCRSR SRRASPADTP EPEEAEPKAD IPLPMETDDN DEEEEQLPTN
RERKASPAAA AADAEDEEAA DESPEPAARA GRKRSRSRQP AEPAGATQLV ASQALTQRGS
AYATQRTLTQ IPRMRFPEME PGNGVGIAGQ IKSIHAEHFM SHQNFEIELG PHLNFITGEN
GSGKSATLQC LQVCLGARAR DTGRSSAAKD LINDQASTAV AKTVLWNTGS DAYQPELYGP
TITITRKLTR SGGSYYYLAA HGRSNRQVKR AEVEAIVMDH FNIDASNPII CLTQDNARSF
AGNASDEEKY NLYMAATGFD AVLRGLAASE AQVGAWKERL RTVQEQLKEK FERITEIKGT
MQEMEEVDSW QAEMDHLNKC IAWVGVLDMR GEAARCRVQV EEDLPRQIVE AEAAAHEKGA
ELEIANADFD AKKVEEQQLT AEMQQFHAEQ KQLVAAAKST DKAHRQAAQA AERAQTALEN
KAAELDNARH TEEDLQQQHM QATQDEAAVQ AREIHEREQA ADAAAAAASC ASQALREAEA
LKMQSERELR ERQGEARDIE GRVRDIQKEL SNLNSSRGDP IAKFGGNDMV RLVQAVDAAA
RQGKFSKRPI GPIGQHLSLS DERWASAVEA AIGGGFDSFL VHSQRDLSEL IDIAKRLRMR
RPVITVLNFD LPAHDLSRRP QLPPDVLTIR HVLRLPEDPE LARVLHNHLL DSDSIERRVL
VPDADAGLHM MRTTDWFRKI SGRGALSNDV WAEDCWRGFV RGDTETAMPF RGTRRGARLS
KDVQGQVVEL EREMASAKEA HKAAQQAVAQ ARREEAEAKQ NVERLRKERG AADRQRARTQ
SQLEDMRASV QEAAAADEPD PDNAEEIERL QEEVHELQRA LDEKRAKAAE TAEAAEGART
AKEAQAEANK AGLAQVEAAG EAFQAAIQNK QAASDAMEEA RARLHELQAK QEESLKDLQE
IMQLLEGLTG DAAQECTEEE AAEARAQLKE LWLGTKRASS DARAEALLTK SEMQDRWDQL
KRDITKRERD MGTNMDALKM ELARLSGWHT AKDAEYKQSA AAWHRFRDAY NKRRRKHEEV
KDHVGKELNT QFNKYLKARK WRGGIKIRDE RGTLTIFAQQ DSSAGRAKTD LKTLSGGERS
FVTVCYLLAL CKKLQGSFHA LDEFDVFMDN VNRGRSLVMI MEFAVSHKET QLILLTPLNM
GAINDAAKGT KRMLPGGDWP NADFMRIRQM VQAQRAGMRA QAADP
//
