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Database: UniProt
Entry: I1GKU4_BRADI
LinkDB: I1GKU4_BRADI
Original site: I1GKU4_BRADI 
ID   I1GKU4_BRADI            Unreviewed;       440 AA.
AC   I1GKU4;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
GN   Name=100827039 {ECO:0000313|EnsemblPlants:KQK12088};
GN   ORFNames=BRADI_1g01560v3 {ECO:0000313|EMBL:KQK12088.1};
OS   Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX   NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK12088};
RN   [1] {ECO:0000313|EMBL:KQK12088.1, ECO:0000313|EnsemblPlants:KQK12088}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bd21 {ECO:0000313|EMBL:KQK12088.1,
RC   ECO:0000313|EnsemblPlants:KQK12088};
RX   PubMed=20148030; DOI=10.1038/nature08747;
RG   International Brachypodium Initiative;
RT   "Genome sequencing and analysis of the model grass Brachypodium
RT   distachyon.";
RL   Nature 463:763-768(2010).
RN   [2] {ECO:0000313|EMBL:KQK12088.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Bd21 {ECO:0000313|EMBL:KQK12088.1};
RG   The International Brachypodium Initiative;
RA   Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA   Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA   Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT   "WGS assembly of Brachypodium distachyon.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQK12088}
RP   IDENTIFICATION.
RC   STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK12088};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the proteasome subunit p55 family.
CC       {ECO:0000256|ARBA:ARBA00006397}.
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DR   EMBL; CM000880; KQK12088.1; -; Genomic_DNA.
DR   RefSeq; XP_003562272.1; XM_003562224.3.
DR   AlphaFoldDB; I1GKU4; -.
DR   STRING; 15368.I1GKU4; -.
DR   EnsemblPlants; KQK12088; KQK12088; BRADI_1g01560v3.
DR   GeneID; 100827039; -.
DR   Gramene; KQK12088; KQK12088; BRADI_1g01560v3.
DR   KEGG; bdi:100827039; -.
DR   HOGENOM; CLU_033860_1_0_1; -.
DR   InParanoid; I1GKU4; -.
DR   OrthoDB; 158659at2759; -.
DR   Proteomes; UP000008810; Chromosome 1.
DR   ExpressionAtlas; I1GKU4; baseline.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IBA:GO_Central.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000717; PCI_dom.
DR   InterPro; IPR040134; PSMD12/CSN4.
DR   InterPro; IPR040896; RPN5_C.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR10855:SF1; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; 1.
DR   PANTHER; PTHR10855; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR   Pfam; PF01399; PCI; 1.
DR   Pfam; PF18098; RPN5_C; 1.
DR   SMART; SM00088; PINT; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50250; PCI; 1.
PE   3: Inferred from homology;
KW   Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT   DOMAIN          230..401
FT                   /note="PCI"
FT                   /evidence="ECO:0000259|PROSITE:PS50250"
SQ   SEQUENCE   440 AA;  50406 MW;  30232EF0285EC6AB CRC64;
     MEGKLDAAIE SLLNVEKQCR LAGDVAGTRK AAVDIVELCH KEGAWKTLND QIVVLSKRRG
     QLKQAITAMV QKAMEYIDVT PDVDTRIELI QTLSSIAAGK IYVEIERARL IKRLAKIKEE
     QGKIDEAADI MQEVAVETFG SMAKTEKIAF ILEQVRLCLD RQDYVRAQIL SRKISPRVFD
     ADTSKEKKKP KEGDNMVQEA PAEIPSLLEL KRIYYELMIR YYSHNNDYLE ICRCYKSIYD
     IPSIKDDPAK WIPVLRKICW YLVLAPHDPM QSSLLNATLD DKNLSEIPNF RLLLKQLVTM
     EVIQWTKLWE FFKDEYENEK NFLGGPLGTK AAEDLKLRII EHNILVVSKY YSRITLKRIA
     DLLCLSLQEA EKHLSDMVNS KSLIAKIDRP MGIVSFRTAQ DSNGVLNSWA SNLEKLLDLV
     EKSCHQIHKE TMIHKVVLKA
//
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