ID I1GKU4_BRADI Unreviewed; 440 AA.
AC I1GKU4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
GN Name=100827039 {ECO:0000313|EnsemblPlants:KQK12088};
GN ORFNames=BRADI_1g01560v3 {ECO:0000313|EMBL:KQK12088.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK12088};
RN [1] {ECO:0000313|EMBL:KQK12088.1, ECO:0000313|EnsemblPlants:KQK12088}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK12088.1,
RC ECO:0000313|EnsemblPlants:KQK12088};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK12088.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK12088.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK12088}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK12088};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the proteasome subunit p55 family.
CC {ECO:0000256|ARBA:ARBA00006397}.
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DR EMBL; CM000880; KQK12088.1; -; Genomic_DNA.
DR RefSeq; XP_003562272.1; XM_003562224.3.
DR AlphaFoldDB; I1GKU4; -.
DR STRING; 15368.I1GKU4; -.
DR EnsemblPlants; KQK12088; KQK12088; BRADI_1g01560v3.
DR GeneID; 100827039; -.
DR Gramene; KQK12088; KQK12088; BRADI_1g01560v3.
DR KEGG; bdi:100827039; -.
DR HOGENOM; CLU_033860_1_0_1; -.
DR InParanoid; I1GKU4; -.
DR OrthoDB; 158659at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR ExpressionAtlas; I1GKU4; baseline.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IBA:GO_Central.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR040134; PSMD12/CSN4.
DR InterPro; IPR040896; RPN5_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10855:SF1; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; 1.
DR PANTHER; PTHR10855; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF18098; RPN5_C; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 230..401
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
SQ SEQUENCE 440 AA; 50406 MW; 30232EF0285EC6AB CRC64;
MEGKLDAAIE SLLNVEKQCR LAGDVAGTRK AAVDIVELCH KEGAWKTLND QIVVLSKRRG
QLKQAITAMV QKAMEYIDVT PDVDTRIELI QTLSSIAAGK IYVEIERARL IKRLAKIKEE
QGKIDEAADI MQEVAVETFG SMAKTEKIAF ILEQVRLCLD RQDYVRAQIL SRKISPRVFD
ADTSKEKKKP KEGDNMVQEA PAEIPSLLEL KRIYYELMIR YYSHNNDYLE ICRCYKSIYD
IPSIKDDPAK WIPVLRKICW YLVLAPHDPM QSSLLNATLD DKNLSEIPNF RLLLKQLVTM
EVIQWTKLWE FFKDEYENEK NFLGGPLGTK AAEDLKLRII EHNILVVSKY YSRITLKRIA
DLLCLSLQEA EKHLSDMVNS KSLIAKIDRP MGIVSFRTAQ DSNGVLNSWA SNLEKLLDLV
EKSCHQIHKE TMIHKVVLKA
//