ID I1GM91_BRADI Unreviewed; 615 AA.
AC I1GM91;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN Name=100842371 {ECO:0000313|EnsemblPlants:KQK12722};
GN ORFNames=BRADI_1g05610v3 {ECO:0000313|EMBL:KQK12722.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK12722.1};
RN [1] {ECO:0000313|EMBL:KQK12722.1, ECO:0000313|EnsemblPlants:KQK12722}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK12722.1,
RC ECO:0000313|EnsemblPlants:KQK12722};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK12722.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK12722.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK12722}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK12722};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; KQK12722.1; -; Genomic_DNA.
DR RefSeq; XP_003557509.1; XM_003557461.3.
DR AlphaFoldDB; I1GM91; -.
DR EnsemblPlants; KQK12722; KQK12722; BRADI_1g05610v3.
DR GeneID; 100842371; -.
DR Gramene; KQK12722; KQK12722; BRADI_1g05610v3.
DR KEGG; bdi:100842371; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR InParanoid; I1GM91; -.
DR OMA; MYTECND; -.
DR OrthoDB; 1202292at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0031425; P:chloroplast RNA processing; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47924:SF179; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 99..140
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 207..241
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 308..342
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 343..377
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 522..615
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 615 AA; 67428 MW; E8D5605FC279B946 CRC64;
MLSPPLAATP TPFLLPAKSK SPLAAAPAAQ QHPLLPYLPQ CTTLRALAQL HAAAVKSGLQ
AHPAFVTRLL TLCTDQGAAK PAQLSYARQV FDRIPGPGDV VWYNTLLRGY ARCSAAGGAR
PPAEEAARVF VRMLEEGVAP DTYTFVSLLK ACAAARAGEE GRQAHGVAVK VGAAEHEYVL
PTLINMYAEC GDARAARTMF GRVDGECVVS YNAMITAAVR SSRPGEALVL FREMQAKGLK
LTSVTLISVL SACALLGALE LGRWIHEYVR KVQLDSLVKV NTALIDMYGK CGSLEDAISV
FQGMESRDRQ AWSVMIVAYA NHSYGREAIS LFEEMKKQGI KPDDVTFLGV LYACSHSGLV
SEGLQYFDSM REFGLVPGIK HYGCVADLLA RSGQLDRAYE FIDELPIKPT AILWRTLLSA
CGSRGDADLG KQVFERILEL DDSHGGDYVI FSNLCANTGR WEEMNRVRKL MNEKGVVKVP
GCSSIEVDNR VHEFFAGDGR HPKSLDARRM VDGVIEQLKL AGYVPNTSHV FHVEMGEEEK
AVSLRYHSEK LAISFGLLNT SPGTTLRVVK NLRVCPDCHS MAKLVSMVFN RRIILRDLNR
FHHFEDGVCS CGDYW
//
